Simple sequence repeat (SSR)
>UN60133 GACCCACTCGCAAACATAGCTAGGTTTTGCGAAAACGTGTAGGGGTTTCGAGGAGAGTCCAATAACTGCAAAAGTATTTGGACCGCCTCGATAC GTCGACATAAGTACAAAGTTATAAGCAGCTGATCCGTACGTGTTGAAGTTTCTTTTAACAAGGCCATTTTGTAGTACGACGTCGTGTAGGGTGG TTACAGGTGGTGGTGGTGGTGATGGTAAGGCGGCGCAGTGACGGAGATCTTGGATGGAAAATGGGAAAAACTGAAAAAGGGTAATTATTAAGGA ACAAAAGAATAAAAGAGCTGAGAATAAAAGCTTTAATTCTGGTGAACACTTCCATATTATTCCGATCAACATTTTGTCTTTGTTGTTGTTTTTG AGGTTTTGGTTTTTTTTCAGATGATGATTTGATAAAGATGAAGAGGGTGTATTTTGGTGTAACCGACACACACCTCAAAAAATA |
Primers for UN60133 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTATTTGGACCGCCTCGATA | 59.923 | 20 | TTCCATCCAAGATCTCCGTC | 60.011 | 20 | 174 | 74 | 247 |
2 | TATTTGGACCGCCTCGATAC | 59.923 | 20 | TTCCATCCAAGATCTCCGTC | 60.011 | 20 | 173 | 75 | 247 |
3 | TATTTGGACCGCCTCGATAC | 59.923 | 20 | TTTTTCCCATTTTCCATCCA | 60.103 | 20 | 184 | 75 | 258 |