Simple sequence repeat (SSR)
>UN60077 TTTAGCCTCAATAAACAATCATCACACTCAATTGATAAATGATTATTCTCATTTTACAATATAGAATAAAAAACAACTCATAACACAATCAAAG AGACAATATCTTGATAAATCCATCAAAAGTAACACCATCATCATAATCACCACCACCACCAAATCTTATCATGGCCTTAATCTCATCATCATTA ACATCTAAACCAGCCATATTCAAATAGCTTCTTAAATCTCCATATCCAACTTTTCCATCACCATCACAATCCATAGCCTTGAACACATCCTCCA TAACACCATGAACATTACTACCATCAGTTTTCAACACCACCTTCTCAAACTCATCGTATTCTACGTACCCATTGTTGTTTGAGTCAGCTACTTT CATCATCGTACCTATGATGTTGTCGTCTGCATGGGAGTAGGAGGTTTTGAGATCTTCATGGCTGATTTTGCCATCATGGTCCACGTCTAGGATG TCGAATGCGGAACGTAGGTTGGTTATGTTTCTTGATGGAAATAAGGATGTTCCTGTTGGACACATAGTTGTTGGTGTATTGTGTGTGTGTGAGA ATTAATGAAAGGGTTTTTGTGGTTTGGAATGAATGTGTGTGAATGTTTTCT |
Primers for UN60077 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGTCGTCTGCATGGGAGTAG | 59.855 | 20 | TCCAAACCACAAAAACCCTT | 59.308 | 20 | 196 | 397 | 592 |
2 | TGTCGTCTGCATGGGAGTAG | 59.855 | 20 | TTCCAAACCACAAAAACCCT | 59.308 | 20 | 197 | 397 | 593 |
3 | TTGTCGTCTGCATGGGAGTA | 60.263 | 20 | TTCCAAACCACAAAAACCCT | 59.308 | 20 | 198 | 396 | 593 |