Simple sequence repeat (SSR)
>UN60059 TTTGATTTTGCATCGGCTAATTGGTTTTCTCACATAATTTATAGAACATATGCGAATTCAGTGCATAACATATGAATGGGAACCTTAGAAAAGC TGCCTACATACACTCATCGGTATGGCTTTGAATCCTGTTTAGCACTTTGATTTAGTTGAGATCTGGGCTTCGCGAATTCGACAAATATAACCCT GCCATCAAGGAACTTCCCATGCATACCCTCAATGGCCTTATCAGATTCCTCCTTTGTTGCATAGCGAAGGAAAGCAAACCCTCTTGGTCTATTA GCAATCTTATCCATCACCAAATTTACTTCAATAAGCTCGCCAAATGACTGGAAAGCATTTCGCAAACTCTCTTCAGTAGTTCGAAATGAGAGAC CACTGACATAGAGCTTGTTTTGCTGTTGTTGTTGTTGTGAGGAAGGAGAAAGACAGGAGACAATATGAAAAGTAGATTTAGATTTGTGTTGGTG TTTGGATAATGTAATTGTTAGTGTTAGTGGTGTAGGAGATGATAAGAAATGACAATCATATTGTGTTGCACTCTTTGTCTTCAACTTATTATTA TTATTGATTCTATGGCACCTGTTGGCCACCGTTAATGTTGAACATGAACTGAAAGCACTTGCCGCCATT |
Primers for UN60059 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCCAAATGACTGGAAAGCAT | 60.081 | 20 | GCCAACAGGTGCCATAGAAT | 59.962 | 20 | 270 | 321 | 590 |
2 | GGAAAGCATTTCGCAAACTC | 59.829 | 20 | GCCAACAGGTGCCATAGAAT | 59.962 | 20 | 259 | 332 | 590 |
3 | GGAAAGCATTTCGCAAACTC | 59.829 | 20 | TGTTCAACATTAACGGTGGC | 59.444 | 20 | 277 | 332 | 608 |