Simple sequence repeat (SSR)
>UN59856 CATAAAGTTAAGAAATATTATTATTTCATCTCCAAGCTTCTATAGTCCAAAGCGCCATTTTTTATTTTAAAGAAATCAAAACCAACGTTGTTGT TGTTGTTACCACTTGTACCATTAGTACTACACCTGCATTCCTTGTTATCTTGTACACCTAAACTGCACGCAAAACATATTGTTCCACCAGTCAT CAAAGGTTGTTGCATGTATGATATTGACGGTATCATATTACTACTATGATGTTGTGGTGGGCCAATTCTTAACTCCAAGTTCAAATCTGGACAT CTTTCTTGTTTTTGATCAGGTGAGGTTATATTGAGCTTAGTGTCTTGTTCCATGTCTTCATTTTTTACTACATGGTCTGTTGTTTTTGTGGTTG CAAAAGATATGATGTCTGGTGGTGGTGAGGTGACATTATGGTTGTTGTTCACGGTAGTGGGGACGGTGGTTGTGGTGGTCGCGGGCGTGGTGGG GTGGTCGGTGACTGGGCGGTGAGTTGCTGGATCAATTCCACGGTTTAGAAGCTTTCTTTTGATGTGTGTGTTCCAGTAGTTTTTTATCTCGTTA TCTGTTCTTCCTGGCAATCTTCCAGCTATTAAAGACCACTTGTTGCCAAGGAGGCTATGAAGTTTGATAATAAGTTCATCTTCATCTTCAGTAA AATTGCCACGTTTAAGATCAGGGCGAAGATAATTGATCCACCTGAGTCGACAGCTTTTACCACACCTTAAAAGGCCAGCAGCTTTAGGTAGTGA CCTCCAGCAGCCTTCACCATGAGTTCTTATATAAGCTATTAACCGATCATCTTCTTCTTTGGTCCATGCA |
Primers for UN59856 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TAGTCCAAAGCGCCATTTTT | 59.72 | 20 | TGTTTTGCGTGCAGTTTAGG | 59.911 | 20 | 128 | 43 | 170 |
2 | TAGTCCAAAGCGCCATTTTT | 59.72 | 20 | TTTTGCGTGCAGTTTAGGTG | 59.911 | 20 | 126 | 43 | 168 |
3 | TAGTCCAAAGCGCCATTTTT | 59.72 | 20 | AGTTAAGAATTGGCCCACCA | 59.429 | 20 | 220 | 43 | 262 |