Simple sequence repeat (SSR)
>UN59855 ACTCGATTCCACACATCTTGGTTGTTCAGCACCAGTGACTGAATAAAAAGATCATTTCATCACACACGTCGAATATCATCCACCCGGTCTATAA CATCCAAAGCCTTAATCCTATCGACATCAAAGTTGATAACCGGAACAGATGAAGGTCTCTTGATTGGAAAAGGATCCCTCTTAATTTCCCTTGT TGGGGAATGACTACTGCTCTTGGTTAGCCTATGGTGCTTGCTTAACCTGTTCCGGGTATCAAATTCTTGACTTTTGCTTATTCCCGGGGTTAAC TTCCTTTTGCTTACGTCCCGAAGCATCTCTCGGTCTTCAGATGTCAGCCCTGGCAGTGGGGAGTTGGGCCTGTTTGTTGAAAGTTGAAGTCCTA TTTGATTTGGGGAGCGAATTGGGGATTTAACAGGTGATCTCATTCCACCGTTTATAGCCCTTGATTGTAAGACAAGATGATGAAGCCATACTAT TAATTCAAGAATACATTCTTCTGTTTTTTCCTTATCTGCATGGTGGAGAGTCTCTATTCGTAATGAGTCAATCGGGCAAGAAGGTTTTCGGTTT GCCTCAGATCCTGTATTTGCCCATTCTCCAACCCAGCCGAAGCCATGATGAGCTTTTGTTGTGTTTGTTGCAATTGGAACGAGCCATTGCAGAG TTTTCTCCATCTCCGCTTTAATGTCAGGGATGGTAAGCTCTTCTTTTGGCTGAAACGAATGTAATCTGGAGCGCATTGCTAACTTAATATTAGG CGGCAGTCCTTGGTACAAAGAATCCCTAGTACTTGGAGGCACAGAACTTGAGCGAGTAACCAGTGTATCAATCTGTGTAATAATATTAGCATAA TGCAGTGCTAGACCAGCTGCTCCCAGTTTCTGTCGATTGCTTTTTACTGGCGCTTGTGTATCAGCTGTTCCAAAAGCATTGTGAATCTCCATGT GTAAGAAATGAACAATATCTACAAGTTGCTCCATTACCTCTTCCAAAATTCTAGACCAAAGTGACTTCTTTTGCAAACTTCTGACATGCTTCTT CTGACTTTTCAAATCTGCCCTCAAGATAGCAAGGCTGTCCCCTCTTGGAGGAGCATTTGGGTTCTCCTCTTCTTGTTGCTTACGTCGAAAATCT TGTTCAAACCTGTCCAATGCATGTAACTCATGGTACAACTCCGCAGTATACTGAACCAAGATCTTCAAATGCTCCATTATTGTTTCTGCTTCTT CTTTCAGTTGCTTCTGAGGAATAAGTTCTGATCCCAATTTTTCAAAATATCGGTCCAAATTGTGCCATTGAGGATCTTTGCAGCGATTTCCGAA ACGAACCACTTCTCCAGAAAAGATTTTTAGTTCTTCCCTCTTATCAGCTGCAGCTATTCTAAGGAGCTCATCCATGTCTTTAGATATCAAGCAT TGCACGCCTTCTGAAGGCAACACGACCTCTTTTAAGTGTTTTATGTTATCCTTTGAAAGGGATTGCATAAGGTTGGCACCCTTAACGATCGTGT TGGCAACTTCAAAGGACAATATTGTAATTTTATTTCCCTTTGCTGCCACCCCCGACACAAAACCACTGCTGACATGCAAGCTTGTCATGCTGCT ACCAAGTGTATCCAGCACTTCTACCGCCTTTCCAAAACCAGCAGTGCCAGCTTTACCCAAAAGCGAACTCACTTCTGAAACCTTATTAACATGA GGCAAGTTGGATTTATGCGCTCTAGACTTATGCGATAACGCCCTGGACAATCTGGGAATCCCATCATTATCATCCATAGCAAAAGACTCACCAT TCATCTCCGGAAAGGAAAACGCCTCCTTGGTGACTCCCCTCTTATTACTCTCCTCCACTGCCACGTCATCCCTCCTGGCCTCCACAGTGACAGG CACCCCTCGTGTTTGATAAACCACACCAGAACCATAATTTATCCCATTCTCTTCAGTAGATCTCCTAGAACATAATCCACCCATATCTAACTAG ATAATTACACACACACACTAATTACTAATTCAACTTCATTTCATGGTAACAGAGTGGTGAGATTAAATAGTGTTTGGTGATTGTGATGATGATG AAGATGAGTTGCTATTTTTAGGTATCGGTGTTGGTGATATTTCGAGGGATTCAATTTCTTTTCTTCTTGTTTTTCTGGTCAA |
Primers for UN59855 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCACCCCTCGTGTTTGATAA | 60.894 | 20 | TCGAAATATCACCAACACCG | 59.395 | 20 | 234 | 1880 | 2113 |
2 | CTCCACAGTGACAGGCACC | 60.311 | 19 | CGAAATATCACCAACACCGA | 59.395 | 20 | 247 | 1866 | 2112 |
3 | CTCCACAGTGACAGGCACC | 60.311 | 19 | TCGAAATATCACCAACACCG | 59.395 | 20 | 248 | 1866 | 2113 |