Simple sequence repeat (SSR)
>UN03144 GAGTTCAAAAGATTTTATTTTTTCCAGTAATATTTGTAGCAAGAACACATCATTCGTAACTTGCTATAACGAGAAAACATATAACAAAAAGAAC CCTGTAATGGGATTTGACCTTTGTAATGTCTGAATATTAGATTATTAAGACCTAGAGGCCCGGGTAACAACTACAATCAACATGACCAAAACAG ACATCAAGAAAGAACTTCTTAGTTTCTTCCCAAAGGCTTCGATGGCTGCACCTTCCTGTCCTTCTCCCTTAGCATTCTTTTCATTTTTTGGAGA CTGAAACAATTTGTTCACCATCTCTATAGTTTTCTCAAGTACTTCCATCATCTTTGCCTTCGTGTTGATAAAGATCCAATCCAAAATGTCCGAA AGTGGAAACGAACCATCAGAAGGTTCAGCGTCCCTCTCTGAAGTACTCTTGTTGGCTTCATTAACCGAATCTCTAAGCTCACGAACTGCGTCAT TGTTCATCACAGCCTCCCATACCGATTTATCAGATGCTAACGAGACCACCATTCTCTGAACAGAGGATTCAGTTTGCAGTAAACGAAAAGCATC ATAAACATTTTGAGAACCACGAGGCTGCAACATACTAGTTGATGGCTCAATCCAATCAAGTTCCCATCCAGAATCTTGAGAATTAGTTGGAGGA TCAACAACCTGTTGGAGGGAAGAGAGTGCATGATTCACTTCATCCATGGATGGAACAGTAGCAAAAACATAATCATCATATTCATTATTAAGGT AGTTCACAGGATGATGATGATGACTAGATGACAAAGATATGATGTCGGAATTATTATTATTATTATTGTTGTCAAAAAGAGGTTGTCTGCGCAG AGCGTTATCAGGGACATCATAGCGCTTCAACATGTGAGAATGACCGGAAGAAGTATCGCCGAGCGCGTATTCTTTTACACCATCTGCTGTAGTA GGGGTAGTGGTATTCTTCCAGAAGCCAATTTGTCGCTCATTAGGATGAGGGTGAAGGTGGAGATCCTCGGATAAAAAGGAGGAGGAACCACCCG TATCAGACGGCATTTCTTCTTATTATTCTTCTTATTCAAATCAACTTATTCAATCAGATCCTGCCTTTTTGGTTACAGCAACAACAACAAGAGC ATAATGATGATGATGAATA |
Primers for UN03144 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATCAACAACCTGTTGGAGGG | 59.82 | 20 | GTAAAAGAATACGCGCTCGG | 59.875 | 20 | 267 | 658 | 924 |
2 | TTGGAGGGAAGAGAGTGCAT | 59.803 | 20 | GTAAAAGAATACGCGCTCGG | 59.875 | 20 | 255 | 670 | 924 |
3 | CAACCTGTTGGAGGGAAGAG | 59.691 | 20 | GTAAAAGAATACGCGCTCGG | 59.875 | 20 | 262 | 663 | 924 |