Simple sequence repeat (SSR)
>UN58152 GCCTAGTATATAGAGCAAGTGCAAATGTCAGTAGCAGATTATGATTAACCAGTAAGATTGCATAATGGAGATAATTTTGATATTACAATGTGAG AAGTTCAGAGATAAAAGGGCAGCGTAGGAGTACATACATCAATTGGATTAAAAAATATATATTAACAACTCCATTCTTCATCAGTAAATCCTTT GTCTTACACGCCTCCCATCTGCTCTGCTCCCATCATCATTCCCACGTCCATATGACGTCACAGAGTGTTCTCTGGTACTCGCAACATATTCCAA TAGCTCAGTAATCACAGATGGGCAGCTCTGTGTTAAGTACTCGAACCCATCACTTTGCATCACAGCTTTAAGATTTTCCGGTTCCGCGACAAAT TTTATGCAAATAGATTTGAGTTGAGAACAATGATGTTGCTCTGCCAAAGCTAAAGTTGTAGCAACAGTGTTAATTGCAACATCCTCACAAAGTT TAGTCTCACAAAGAAACCGGAGCCTCTCAATCCCATACTGATCAGCTGCTGCAAGCAGATGCTGGGCCATAAGTGTGGAAGCCCATTGTGGGCT TACACCCACAAGCTCTTCCATGTCTGGGAGCTTATCCCAATATATGAAATGGAGTAGAGCCTTAAAGACTGAAGGTTCTATTTCCTGTACTTTG ATGGAATCAGTATTATCGTCCTTCATAGGACCAAAAAGTTGTGCTTTGAAGACAGGTGAACGTGCAGCAAGGACCAACTTGTGAGCTCGAAACA CTTCTCCATCAACTTCAAGGTTTACATCTGTCAATTCTCCACTTTCCAAGAGATGACCAAAATGCTGACTGATATCAGATGGCGGCGAAGATAT GCTAAAAATTTGAGGACCCTCTGTACATGACTTAACAACACCAACAGTGCACTTAACCAAGAGACAATCATCTTTGAGATAGTCTGATGTTTCC AATGCTGTCCTTCTTAAGAAACGCTTGTAACCCCACATGCTTCCGCGGTATTTGAGAGTATAAGGACCAGCATCCAAGAGCCTGCCAAAATGAG TATGAACTTTATGTCTTCCTTTACCAGTCTGATCCATCAAAGACAGCTCGAACAAAGCGCGAACATCAGTGGCATCACTGGCAAGAGCAATGAA CAAAGAGACATAAGTTGAATTATCTTCAGGGCTTTTGCCATCAGGATAGAAATAAATAGCCCATGTATGACCACCAACACTAAATGATTCTGAA GCTATGTACTTTCCAACACCCATTCCTTTTGATGATTCATAACCACTTATCTTGAATTCATGAGATGCGTTAACTGTGTCGGTTGATGAGGTTG ATGATGATGATGTTGTACTACTTGGAATTGGAATTGCCCTTTTTGACTTTGATGATGATGATGATGATGATACTCTCACCATCGTACCCATTAA TTTAATTTAATTTATTTCTTCATCACAGGGAAAATCTTAACAAAGCCGCTTGTTTGT |
Primers for UN58152 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCGGTTGATGAGGTTGATGA | 60.048 | 20 | CGGCTTTGTTAAGATTTTCCC | 59.957 | 21 | 158 | 1301 | 1458 |
2 | TTGGAATTGCCCTTTTTGAC | 59.916 | 20 | CGGCTTTGTTAAGATTTTCCC | 59.957 | 21 | 115 | 1344 | 1458 |
3 | CCCATGTATGACCACCAACA | 60.088 | 20 | CGGCTTTGTTAAGATTTTCCC | 59.957 | 21 | 271 | 1188 | 1458 |