Simple sequence repeat (SSR)
>UN58052 GAAACTATCATCGACTGCTAGCCGATGTAAAAATGGTTTGCTCTGAAACCATAATGAGCGTAAAAAATTGTCTTAATATATGATATAGCTAATA AGCTAAGTACAATAACGCGATCATGTGAAACTATCATCTCCATCTACTCGACAAGAAATCAAACCTACCGAAACTAATACTATTGTCATCGTTG CACAAGAAGCCATTATCATTACCAATGCCAACAGCCCCTCCACACCCGTCAACAATCTTTTTGTTATACAAAGAAAATGCAGAAACCGGTGGTG ACAATGCTGCTACGGCCGCTACTGTCACCATCTTCTGGTCCGAAACCATAGGTAGACCGATTGAGAGCTCGAGATTGATCTCTGGTTGCCTGTT GCTTACGACTGGTGTACATTCTTCAGTTGACAATCCACTAGTGGTGCTACCATTACCACCAACACCGCTATTAGACGATTCAACCACCTGCGCG GAGTGTTCTTGTGGTACCACTGGTGTCTCCTCAATGGTTTTTACGGCATTGGTTGTGGTAGTGGTAGTGGTGGTGGAATTGTTAGCAGCTAGTT TCCTTTTGATGTGTGTATTCCAGTAGTTCTTGATTTCGTTATCTGTTCTTCCGGGTAATCTTGATGCAATCATAGACCATTTGTTACCAAGAAC TGCATGAAGACTAACAATAAGTTGATCTTCTTGAGGTGTAAAATTGCCACGTTTCAAATCAGGCCTTAAATAATTAATCCATCTTAACCTACAG CTTTTACCACACCTATTCAAGCCAGCAGACTTAGGAAGTGACCTCCATGAGCCTTCACCATGAGCATTAATATAAGTAACAAGTCTGTCATCTT CTTCTTTGGTCCATGCACCTTTGTTGGTATGATCTTTTTCACAACAAGGTGATCTCACCATTTTTTTTATTTTTTGGTTTCAAAGATGGAAGGA AAGTATGGATGGATGGATGGATGGGAGGGAATGAAACAAGTGAGAATTGATGGTGTGGAAATAAATAAGGAGTTTGGTTGGTGTGGGAGAGAGA GAAGTGGTTGTGATTGAAGTTAGTGCTG |
Primers for UN58052 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CACACCTATTCAAGCCAGCA | 59.864 | 20 | CCACACCAACCAAACTCCTT | 59.861 | 20 | 267 | 760 | 1026 |
2 | GAGCCTTCACCATGAGCATT | 60.226 | 20 | CCACACCAACCAAACTCCTT | 59.861 | 20 | 226 | 801 | 1026 |
3 | CACACCTATTCAAGCCAGCA | 59.864 | 20 | CTCTCTCTCCCACACCAACC | 59.682 | 20 | 276 | 760 | 1035 |