Simple sequence repeat (SSR)
| >UN57742 ATAGTTACATAAGAAAGTAACGAAATATGAACGACATCCCTATAGGCTATAGCGATCATTTAGTTTGTGGCTTCTTCCACAATACCCCAATCCT TTTGAGCACGTTACCATTTTTCCTCTTTACCAACTCATCATCATCATCATTATCATTCTCGTTATCATCATCAGTATCCACGCTACTAGGTGAA CCCGTGTTCATCTTTTTCTTTGGGCTAAAATGACCCATTGACCATGTTCTGTCCGCCAACATTTGACCATTGTTGTCATTATTCTCATCACAAA GCATGGCTGTAGCAGCCTCTGCTGCCTTTCGCCATTGGCTCATTTGCACTTTCAACCTTTTTAACTCTTCCTCTACATCACACTTACTTGCCTT CACTGCCTCAACGACACCATCTGCTTTCTTGATTTCTAGTTTAAGCTTCTCGTTTTCTTCTGACTTGTTGCATACTTCTGTCTCAAGACTCGTT ATGTTTGACTTTAAACTGTTGAAATCTTGGTTCATTTTCCTGATTTCTTGTTTAAGCGTCTTGTTCTCATCTGACTTTTCACGCAATTCTGTTT CCACATTTGCTAAACCTGAATTTAAAATGTTGGAATCTTGTTTTGATGCCTCCACCAAACCATTCATTTTCTTGATTTCCAGTTTGAGTTTCTC ATTTTCATCTGACTTTTCATGTAATTCTGTCTCAAGACTTGTCAGCTTCGACTGTAAACCGCTAATGACTTGCTTTGACTCTTTTTCCACCTTG TTTTCTAGATTTGTTGTCTTCATTTTTTCGATAATATCTTCTAACAAACGTATACGTGCTCTTGAATGGTCTAACTCCAAAACAATGGTATTGT GTTCGTCACTGTTTAGCTTAAGTGACTCCATGGTCTTTTTTGCTGTTTCAAGTTGTAGTAATGTTTTGCTTGCTAAGGCTTGGGCATGAGCTTC TGAACATTTGCTATTTTCAAGTTGGTTCTTCATTTCCTCCATGAGTAAATGTGTTTCACTCAAATTCTCTTTCAATTTAAGTATCTCCGCGTAC GCTGATTCTGCTTCTTTGGTTTGCTTAGCTTCAGATTCTATCGTTGCGTCGAGTTTGACTTTTAGTTGGTCAATCTCTAGTAAGGCAGTAGCCA ATGCAGATGAATGGATTGAGTTCCATGCTTCGTCGCTCTTCAGATCATGCTCTTCGTTGGATGAAAACTGAGCTAAGCGATTTTGAGACTCTTC AAGTCTTAAAGTCAAGGCTATAAGCTCGTTTCTCGACTCTTCTGCATCTAATTTAGCTTGTTTCTTCCATGATTCAGACACAATTAATTGATCC TTAACCGTCCTCAAAGCGTCCTCGAGCTGAGAAACCTGAGTTTCGAGTTCAGCAACTCTTCCTACACGCTTCTTCTGCAACTCAGTAGCAACGG GGCCTCTTGGTGATGCGCGGTCAGAAATTTTAGGACTTCTAGTTTTTGGCGAAGAGTTTGTTTCTTGACTATTTGTCTTGAGTTGGCGAACTAC ACGACTAGAGCTCTTTTGTGCAGTGTCTATAGAAACCGAGCGAGGACTTACCCTCCGAGCACCTTCAGATCCCGAAGAGCTCTTTATGCTTGCT TTTGGAGTCTGCATTTGAAATTCAAAATCAACCGAATATGGAAATT |
Primers for UN57742 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GCTTCTTCCACAATACCCCA | 59.933 | 20 | GCTACAGCCATGCTTTGTGA | 60.019 | 20 | 226 | 70 | 295 |
| 2 | TGGCTTCTTCCACAATACCC | 59.933 | 20 | GCTACAGCCATGCTTTGTGA | 60.019 | 20 | 228 | 68 | 295 |
| 3 | CCAATCCTTTTGAGCACGTT | 60.11 | 20 | GCTACAGCCATGCTTTGTGA | 60.019 | 20 | 209 | 87 | 295 |