Simple sequence repeat (SSR)
>UN57622 CTTTTTCTCACCGCCGCCACTGCCTTTTTTCTCACCTTCATTGCCACCTTCTTTTTTAGCCGGAACAATCTCCACCGCCCTTTTCAACTTACTT TGCAAAGCAGCAGCCAAAATCTTCATATCAATCGCACCTTTAACTGTTACCAAATCTTTTTCCTTATCAAGTGACATCTCCATATATCCCTTAG TTTTGGTGACAAGCTTATGAATCTTCTGAATACAACCTTGACAATGTAACGGAACCTTCAACACCGCCGCTGTCACCGGTAACTCTTTTGGTTT TTTCTCATCTTTCTTCGTTGTTTTGTCATTATCGTTTTCAGCTTGTTTCTGTTCTTTCTTTTTACTGCCACCGCCACCGTCACATTCGGTGGTG GCATTGCCGTCCTTTGGTTTTTTACTTACCGGAGATAATAATTCCACTTTCTTCTTGGTTTTTTCTTCAACCTTTTGCCTGAGTTTGACCGGGT CAACAATTCCGATCATTGTTAGCTTGCTTAACTCACTGTCACCAATCCTTACAGATTCAACACCTTTATCAAATTTCATTTCACCATCTCAACT CCAAAATTCGTTCAACGCCTTCTTCATCTTCCAAAATCAGTCACTTTTATGCTTAATCATCATCATCATCATCACCATATGTCACTCGCCTTCG ATATCGAACCCAACAGTCACGTTCGTGCAATATCTTATAATCTCAGTAGCTACAATAGATCACCCATTAAAAGAGCTGTAAGCTTCTAAAACCG TTTGGTACCGAAGACGATCCACGCCCCAAAACTTTGAAACGATCTGATATACTGAACATATGAGAGTGTGTGAGATCTACAAATTTTTTTGATT TGAAATTTTTTAGATTTGATGATGATGAAGATGAATGTTTGGTGTTTGTGTGTGAGAGAGTGCGTGTGTTAATGAATGAGAGAGAGAGAGAAAG AGA |
Primers for UN57622 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACGCCTTCTTCATCTTCCA | 59.813 | 20 | ACGTGACTGTTGGGTTCGAT | 60.431 | 20 | 103 | 578 | 680 |
2 | CAACGCCTTCTTCATCTTCC | 59.813 | 20 | ACGTGACTGTTGGGTTCGAT | 60.431 | 20 | 104 | 577 | 680 |
3 | ACGCCTTCTTCATCTTCCAA | 59.813 | 20 | ACGTGACTGTTGGGTTCGAT | 60.431 | 20 | 102 | 579 | 680 |