Simple sequence repeat (SSR)
>UN57567 TTCCCATTCCCATTCACATAACTATAATTACAATACATCAACCCCGTCGTCCCACCATTCGACGTCTCCCTATCCAAATTCCTAACAACGCCAA CTTCACTAACATCCGAACCCCAATTAAACATCTCCCCACTCGAATCCGTCCCCATTACAATATCCGAACACGTCCCCCCAACCGCATTCGAGCA GCTCCGTCCCGAAACAGCGGAAACGGACCGCGAACCGCGCCTACGCCTCTTCCGCGCCATCCAGTGCATTCGATCACGCCGCGAACGTGACTTA ACGGATGATCGGTACCCTTCGTCTTCAAATATCGACATTTTCGACATGTCTAGGGTTTCGATTGACAATGTTGTTGTTGTTGTACGGTCGGTTA AACATGGTCGTTTTGAGGAGGGTGTTTGGGATTGGGTTGGATCGAAGGGGTGCCAGTTGTGGAGATGGATTGTGCACGTGTCGATCACGTGACG GGAGTTTGTTAGGGTTCTTGGTGACATTATTTGATTGTAATTGTTTGTTGAAGATGATGAAATTGGAATTGGGATTTTAGGGTTTTGAAAATTG GGGGAAATTTAATT |
Primers for UN57567 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CGTCCCCATTACAATATCCG | 60.031 | 20 | CCTCCTCAAAACGACCATGT | 59.966 | 20 | 257 | 141 | 397 |
2 | CGGTACCCTTCGTCTTCAAA | 60.103 | 20 | CCTCCTCAAAACGACCATGT | 59.966 | 20 | 106 | 292 | 397 |
3 | CGGTACCCTTCGTCTTCAAA | 60.103 | 20 | AATCCATCTCCACAACTGGC | 59.934 | 20 | 156 | 292 | 447 |