Simple sequence repeat (SSR)
>UN57453 TTTTTTTAAAAGAAAACGAGCAATGTAATTACGAATTCTTGGCCAAACTACACGATTAGTACATTACGATATTCGAGTACTTAAAAGATCAAAA TACAATTTAACAAACATATGACAAATGAATCCAAGACAGCTTCGGGGTAGAAGAACATTGAAATACAGCTAGTTTTGTTTATTTTGATCTTGAT CACAATATTGAGCACGCCTTTTGAGCCTTTCCCTTCTTCTTCTTTGACTTTGGTGGTGCAAGAACGACTTTAATGGCAGCATCAAAAACCTGCT TCACATTCAGCTGTGTTTTTGAACTACATTCAATGTACTCAGGAGCTCCGATCGTCTTCTTCAACTCCTCACCCTGCGCAGTAGTGATGGGGGT TGCACCGGGATGGTCAACAAAGAACTGCTTGTCATCCCGAAGATCAAGTTTTGTCCCAACAAGAACAATTGGGACACCAGGGGCATAATGCTTC AATTCTGGAATCCACTTCTTAGAGACATTTTCATAGCTGGCTTTGCTAATAAGAGAGAATGCCAAAATGAAGACATCGGCCCCACGATAACTCA GCGGTCTTAATCTGTTATAATCTTCCTGTCCAGCAGTATCCCACAAGCCTAGATTAACCGTGCTTCCATTAACAACCACATTGGCACTGAAATT ATCAAACACCGTCGGGACATAGTCCGTAGGGAAAGTGTTGCTAGTATAAGAAATCAAAAGACAAGTCTTTCCAACAGCCCCATCACCAACAGTA ACACATTTTATAAATCTTGATGCACTCATCCTTTTTCTTCTTCAGATCTTCTTCTTCTTCTACACTCAGCAGAAGACCTGATCACCAATCAATT CAATTCTAAAAAATACCCTTTTCCTCTTTTTCAATTCCCTACAATACCCACTTTTTACTTTTCTCTAAAAATCAACCAATTATTTTTTCACACT AAACCTCAAGAAAGAACAAACAAACCCTAATGCCAAAATGTGAAGGAAAAA |
Primers for UN57453 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCCCCATCACCAACAGTAAC | 60.24 | 20 | TTTTCCTTCACATTTTGGCA | 59.133 | 20 | 256 | 735 | 990 |
2 | ACAACCACATTGGCACTGAA | 60.008 | 20 | TTGGTGATCAGGTCTTCTGCT | 59.859 | 21 | 205 | 636 | 840 |
3 | AACAACCACATTGGCACTGA | 60.008 | 20 | TTGGTGATCAGGTCTTCTGCT | 59.859 | 21 | 206 | 635 | 840 |