Simple sequence repeat (SSR)
>UN57281 TTTTTAGAACTTTAAAAAGCAACTACTAGTAGTACATTTTGGAAATGTACAAGCTGTTTTAAATACACAAAAGTAAATTACATCAACAAAGTAC ATGAAGAAAGCCAAGGAAACTTATGTACATCAGATGAACTTAACAGTGGGTTTGGGATTTTCATTTTTCACCCCTTCCCATATGAATGGTCTTT TTATACCACAAAGTTAAACGACGCCATTTCAACAACTACAACATAATGTACAAACATTGAGACGCTAAAACAATCGATCGGATGGGGACTATGG GTCGACTGGGCCCGCTGTCATGTCATCATCTCCAGAGTCATATTCTTCTTCACTCAGCTCCTCGTCACTTGATTTTTCCTCTGGAAGGTCACCC ACATCTTCTGGTTTGGCATACTTTTCACGGTACTCTTTCACTCGTTGTTCATAAAGAGTTTTATCACGCATCATGAGAGCAGCAGCCTCCCCGT TCAATGGATCCGAAGCGTTTGGGTACAGCAAAAGTTGTGGAAGGAACACCTCAAACACATTCACCAAGTCGAACATGGGGCTCCACGTCTGATT AATCACATCCAAGCAAACCGAACCAGACATTTCATCCACATTTGGATGGTAAATTTTGTTGACAAAGCCAATGGATGGAGATTTATAAGGATAA GCATCCGGAAGCTCAACCCTTAGCTTCCACACACCTCCATGGTACGGACTGTCAGCAGGTCCATGAAAATGCACATAAAATTCTTGCATCCCAT CATTGATCATCTCCACTTTGTAATCACTCATCATCAACTTCATCAAGTCCATTTCTCTGCGTTTGCTTGGAGAAGACATTTTTTTTCTTCTTTT TCTTTTCTTGGTTGAATTTGTGTGTGTGTGTTTTTTAATGTGAGAGAGATAAGAAAGAGAGTTTTAAAGACTTTAGA |
Primers for UN57281 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GACTGTCAGCAGGTCCATGA | 59.827 | 20 | AAAACTCTCTTTCTTATCTCTCTCACA | 57.713 | 27 | 207 | 705 | 911 |
2 | GGTACGGACTGTCAGCAGGT | 60.182 | 20 | AAAACTCTCTTTCTTATCTCTCTCACA | 57.713 | 27 | 213 | 699 | 911 |
3 | TGTCAGCAGGTCCATGAAAA | 60.24 | 20 | AAAACTCTCTTTCTTATCTCTCTCACA | 57.713 | 27 | 204 | 708 | 911 |