Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN56524
ATGACATTTATGCCCTTAATATTTGATGGAGTGTACAAATCACTTCCCTTTTCCAAAGTTTCATTCTAGTGACCAAAATGATCTCCAAACATAT
TCAAAGATTTTACCCTGTACATAATTATTTATCTTTTTTTTTTTACTCTATTTTCCTTCTTTTTTTCTTAATATAATTAACAGATCGAGAAATA
ATAATAACAAAAGATTGCTTCTTCTTTTTTTTTCTCCGATCAATAAACCTAATAATAATAATATTATGACTAATCAATTTTACTAATCCCAATC
CTCTTCACCACAGCAGGCACCACACCATTTCTAAAACCCTCACCACCACCACCACCACTCATATAATTTCTCACTTCTTTCCTTATCATTTCTT
GCATCACACTCATAAACTCGTCGCTAAAAGGAGCAGCAACAACTTTTTCCTGTTGCTCAACTGTCGCTACATCTCGCGACACTTTTAAATCACG
CATAGCCGTCGATATGGCCATCGGTATAGTCGTCATTAGATCCACGTTGCTGTTCAGATTTACCGGAAACTTTCGTAACGGCAGCGCGAGAATC
GGCGCCACAGGTGACGGCGGCGGTAACGGACTCGCCACCGGTGACCGCGTCGTCGCTGCAACTGTCACCGTCGGCGTAGTTTCATTTTCAACTC
CAGGTAGCGACAGACTCAGCGACGTCGGTGGATCCACCACTTGCGACGGTGCAAAAGGCGGCGACGGCGGAGCGACGACAGCACCAGTTCTAGC
GACGGGACGAAACACGTGAACACTAGAGTCACTAACATCAGATCCAGAAGGACTACCAGGATTAAAATATCTCCCAAAACCATTACCAACGACC
GCAGAACCGTCGCTAACAGACCTTTTTAGCAACGGTTGTTGAACAGCAAAGTCACTAAACTCTTCATTAGTCATTGAAGAGCTTTTTCTCTTCA
AAGTCGAATTCCAATGGTTCTTGATCGCGTTATCCGTACGACCATTCAAAAGTCTAGCAATAGTCGCCCATTTATTCCCAAAGCGCGCGTGGGC
GCGTAGGATAGTCTCATCTTCTTCAGGCGTAAAAGACCTGTGCTCAACTTGTGGTGATAACTGATTACACCACCTTAACCTACACGACTTACCA
GATCTACCAGGTATAGATTTACCAATTAACGACCAGTTTCTCGGGCCGTGTTTTTCGACGAGATTTTGCAACATCTCGTCTTCTTCAGGACTCC
ATGGTCCTTTTATCCGATCGATATCTCGTTTCGGGTTATGACTTGCCATAAACATTTAAATTTATAAAAATATTTTTATA

Primers for UN56524 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1CAATCCTCTTCACCACAGCA 59.83120CGACAGTTGAGCAACAGGAA 60.02520165 278442
2ATCCTCTTCACCACAGCAGG 60.26120CGACAGTTGAGCAACAGGAA 60.02520163 280442
3CAATCCTCTTCACCACAGCA 59.83120TGCTCCTTTTAGCGACGAGT 60.15420134 278411