Simple sequence repeat (SSR)
>UN56524 ATGACATTTATGCCCTTAATATTTGATGGAGTGTACAAATCACTTCCCTTTTCCAAAGTTTCATTCTAGTGACCAAAATGATCTCCAAACATAT TCAAAGATTTTACCCTGTACATAATTATTTATCTTTTTTTTTTTACTCTATTTTCCTTCTTTTTTTCTTAATATAATTAACAGATCGAGAAATA ATAATAACAAAAGATTGCTTCTTCTTTTTTTTTCTCCGATCAATAAACCTAATAATAATAATATTATGACTAATCAATTTTACTAATCCCAATC CTCTTCACCACAGCAGGCACCACACCATTTCTAAAACCCTCACCACCACCACCACCACTCATATAATTTCTCACTTCTTTCCTTATCATTTCTT GCATCACACTCATAAACTCGTCGCTAAAAGGAGCAGCAACAACTTTTTCCTGTTGCTCAACTGTCGCTACATCTCGCGACACTTTTAAATCACG CATAGCCGTCGATATGGCCATCGGTATAGTCGTCATTAGATCCACGTTGCTGTTCAGATTTACCGGAAACTTTCGTAACGGCAGCGCGAGAATC GGCGCCACAGGTGACGGCGGCGGTAACGGACTCGCCACCGGTGACCGCGTCGTCGCTGCAACTGTCACCGTCGGCGTAGTTTCATTTTCAACTC CAGGTAGCGACAGACTCAGCGACGTCGGTGGATCCACCACTTGCGACGGTGCAAAAGGCGGCGACGGCGGAGCGACGACAGCACCAGTTCTAGC GACGGGACGAAACACGTGAACACTAGAGTCACTAACATCAGATCCAGAAGGACTACCAGGATTAAAATATCTCCCAAAACCATTACCAACGACC GCAGAACCGTCGCTAACAGACCTTTTTAGCAACGGTTGTTGAACAGCAAAGTCACTAAACTCTTCATTAGTCATTGAAGAGCTTTTTCTCTTCA AAGTCGAATTCCAATGGTTCTTGATCGCGTTATCCGTACGACCATTCAAAAGTCTAGCAATAGTCGCCCATTTATTCCCAAAGCGCGCGTGGGC GCGTAGGATAGTCTCATCTTCTTCAGGCGTAAAAGACCTGTGCTCAACTTGTGGTGATAACTGATTACACCACCTTAACCTACACGACTTACCA GATCTACCAGGTATAGATTTACCAATTAACGACCAGTTTCTCGGGCCGTGTTTTTCGACGAGATTTTGCAACATCTCGTCTTCTTCAGGACTCC ATGGTCCTTTTATCCGATCGATATCTCGTTTCGGGTTATGACTTGCCATAAACATTTAAATTTATAAAAATATTTTTATA |
Primers for UN56524 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CAATCCTCTTCACCACAGCA | 59.831 | 20 | CGACAGTTGAGCAACAGGAA | 60.025 | 20 | 165 | 278 | 442 |
2 | ATCCTCTTCACCACAGCAGG | 60.261 | 20 | CGACAGTTGAGCAACAGGAA | 60.025 | 20 | 163 | 280 | 442 |
3 | CAATCCTCTTCACCACAGCA | 59.831 | 20 | TGCTCCTTTTAGCGACGAGT | 60.154 | 20 | 134 | 278 | 411 |