Simple sequence repeat (SSR)
>UN56233 AAGTGTAGATTCCTGCTTGACGGAACTCTTTGACTGGTTTAACCGACGTAAATTATTATTACATTAGAATCCATAAATATTAATACATAACGAT ACAATCAAAAACGGTAGAGCTAATGTTACAAAGACCACCAAGTAGGGAAGGGAATCATTGAACGGTTGACCCACTAAGCTAACGAAAAACAACA CTACGCCTATGAGAGCGAGAATCATGAATGGAAGCAGTATCTTGATTATTCGGCGACAACATCGTGCTCCGGTGGCGGCAGCGGCAAGAATTAC GGCAAGGGAAATCGATTCCGACGACATCGGTGGCAACAACCGCAAACCTCAAAAATCAGCTGGTGGTGGTCCGCTCGTGGTGGGTTGGTGGTGG TCGGCTCGTGGTCGGATGGTGAGGGTACGTTATCTGACGGCGGCTGGGAGGATTCCGTCGGTGTGGCAGATATATGCATAAACTAATTCCGGCC AAAAAGTTCGATGGGTAACACAGATTCCGGCCACTGCAGCAGAAGATTCCGGCGACCTGTAGCGACAAATAGATTTTGGCTGCGGTAATGAATG ATTCCGGCTACGGCAGTGAAAGATCCGGCAGCGGCATCTAAAAATTGTCATAATCTTCAAAACCGAAAAGAAAATGGTAGTCCGGTGGAGGGTA CGGCGGTGGAGAACGGTACGGCGGTGGTGATGGGTTTTAGGCTGTGGTGGGCTTTTGATGGTGATGGGGTTCTGTCAATTTTATGGTGTATTTG TGCTAGAGAGAGAGATTGTGTTAGAGAGAGAGAGAGATTGGTACTGAGAAAAAGAGAGGACAAAGTGTGTGTTTGAAAGCTTTGAAAAACTTTG ACTTTCAATTTCAATTTTCAACTTTTCACAATTCCCCTTTGACCCTTTTTCCATTTAAGATAGTAGAGAT |
Primers for UN56233 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATGGGTTTTAGGCTGTGGTG | 59.853 | 20 | ATGGAAAAAGGGTCAAAGGG | 60.159 | 20 | 213 | 688 | 900 |
2 | ATGGGTTTTAGGCTGTGGTG | 59.853 | 20 | AAAGGGTCAAAGGGGAATTG | 60.159 | 20 | 207 | 688 | 894 |
3 | TTTGATGGTGATGGGGTTCT | 60.173 | 20 | ATGGAAAAAGGGTCAAAGGG | 60.159 | 20 | 189 | 712 | 900 |