Simple sequence repeat (SSR)
>UN56201 CTGTTGATATATATATAATAAAAAAAAAACAAATCTTTTGCCTTGGCTACAAAATCTTGTATTCTGCATAACCCATTTTCAAAAATAAACCCAT TATGCAGATCAGATTTCAGTTCAGATCATACACTTACAAATTACCAATAAACTTACACATGGCCAAGAAACATAAAAATGAAAAATATATTTAC CGGCGACAACATCGTGCTCCGGTGGCGGCAGCGGCAAGAATTACGGCAAGGGAAATCGATTCCGACGACATCGGTGGCAACAACCGCAAACCTC AAAAATCAGCTGGTGGTGGTCCGCTCGTGGTGGGTTGGTGGTGGTCGGCTCGTGGTCGGATGGTGAGGGTACGTTATCTGACGGCGGCTGGGAG GATTCCGTCGGTGTGGCAGATATATGCATAAACTAATTCCGGCCAAAAAGTTCGATGGGTAACACAGATTCCGGCCACTGCAGCAGAAGATTCC GGCGACCTGTAGCGACAAATAGATTTTGGCTGCGGTAATGAATGATTCCGGCTACGGCAGTGAAAGATCCGGCAGCGGCATCTAAAAATTGTCA TAATCTTCAAAACCGAAAAGAAAATGGTAGTCCGGTGGAGGGTACGGCGGTGGAGAACGGTACGGCGGTGGTGATGGGTTTTAGGCTATGGTGA TGGGGTTCTGTCAATTTTATGGTGTATTTGTGCTAGAGAGAGAGATTGTGTTAGAGAGAGAGAGAGATTGGTACTGAGAAAAAGAGAGGACAAA GTGTGTGTTTGAAAGCTTTGAAAAACTTTGACTTTCAATTTCAATTTTCAACTTTTCACAATTCCCCTTTGACCCTTTTTCCATTTAAGATAGT AGAGAT |
Primers for UN56201 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAAAATGGTAGTCCGGTGGA | 59.79 | 20 | ATGGAAAAAGGGTCAAAGGG | 60.159 | 20 | 253 | 584 | 836 |
2 | GAAAATGGTAGTCCGGTGGA | 59.79 | 20 | AAAGGGTCAAAGGGGAATTG | 60.159 | 20 | 247 | 584 | 830 |
3 | TTTAGGCTATGGTGATGGGG | 59.778 | 20 | ATGGAAAAAGGGTCAAAGGG | 60.159 | 20 | 193 | 644 | 836 |