Simple sequence repeat (SSR)
>UN56104 CTTGATTATAATCAAACTGCAAAATCTATAAATTGAAATGATCCATATTCAGTATTAGAAATACAAAATAAGCGCCGAGAAACGTCTAGACTCA AGAAGAGTACCAGGATATATAGGGCATCACTCATCCATGAGTGTTAAAAGCTTCCCATAGTAAGTTCTGAGGAGCTGGGTTTGTAAGATCACGT GCCTGCAGAGCCGCGGTTCTGAGTGTTTTAAGTGTTGTCACATTGGCATCATAGAATGATAGGCTTGTGTAAGGCAAATTGTGTTTCTTGCAAA GATCTTTAACAATAGGAGAAATAGACCTCAAATGGCATCGAGGTAACCTTGGAAACAAATGGTGCTCGAGTTGGAACTGCAAACCACCAAAGAA CCAGTCCATGTAAGATGAGCAAGAAATATCAATGGTCCCATTGGTCTGCTTCTCAAACCAATCATTCCCAGTCGGTGGACCTATGTACACGTTA GCTGCAAAGTGGTTCAATGTAAATTGAACGTGTTGAATCCCGGTGACACAGAAGCTAACCAATACAAACGCGACTCTCTCTGGCCAGTTGGGTA GGCATGACACAAGGAGCGGAAACCAAGTCCAAAAAACGAGAGTCCCAAGAATGTTTAATCCTCGGTCAGGAATTCTCCTCTTTGAGATGAGCAA CAGCAATGTTTGTAGATAAAGGTTGACCCTCGCAACACACATGATTGGGTAATATGAGTAATGTTGGTAGCTCACGAAGAACCGAGCCAGCGGG TCAAATGTCAATTGTCTCCCATAGAAAACAGATGTCAACGAGTTAAACAATTTATTAGAGACTGCTAACATTGGCAAGTGCTGAAGATCAGGAT CATAATCGAGACTGTTACATGCAATGTGATGAGCATTATGTGTCCATTTCCACCATGCGATACTTATTCCTGTTATACAGTTCCCAATAAAGAT ACCTGCAAATTTGTTCCACCCACGAGTCGCCATCATTTGATAATGTCCAGCATCATGACCTAGATACGCGATTTGCATCCAGGCTAATCCCAAC ACTGCACCCGCCATCATATGAACCCAGAAACTAGTAGAATATAATACCCCATATACACAAGCAGAAAGAAGCAAAGATACGAAACAAAGTGAGT AAATCACGCCATGCCCTTTCTTTTCAAACATCCCAGCTTTTGCAAACTCAGAAGCAAGCTTTCTATAATCCTTTGAGACTTCTGAAACATGGTA GTCTTTCAAGTGATACCCAGTGAAGAGTTTATTGAGGTGTTGCCACGCTGAGCCCGGGTGAAAAGCGATAAAGGCATCTGTTACATCCTGACCA GCAAGGTTCATGAGAGGAATGTCCCCACCAGGGTGTATTTTGGCCCATTCTGTAACATTGTACACTTTGCCCTGAATCGAGATCCATAGGTCGT TAGCCTTATTGTGCTTCTGTAACTCCTCGGATGTTATGTACTTCTTTCCATCAGCTGTTGAATTCATAACTTCACCAGCAACAACAGAAGGTGT CTTCACCGTTAAATCTTCACACATGATTATTATTATTATTATTATCTCCTTCAACAATCAACACACACCGATTTATTTTTATTTTTAAATTTTT TTATAAAAAT |
Primers for UN56104 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCCCTGAATCGAGATCCATA | 59.998 | 20 | TCGGTGTGTGTTGATTGTTG | 58.974 | 20 | 191 | 1385 | 1575 |
2 | GCCCTGAATCGAGATCCATA | 59.998 | 20 | CGGTGTGTGTTGATTGTTGA | 58.974 | 20 | 190 | 1385 | 1574 |
3 | ACACTTTGCCCTGAATCGAG | 60.255 | 20 | TCGGTGTGTGTTGATTGTTG | 58.974 | 20 | 198 | 1378 | 1575 |