Simple sequence repeat (SSR)
| >UN55959 TTAAGCCTACTAAAACAATTATCGAAAGTTACCAAATATAAAGTGTAACTACCAAAGCTTTTGGCCTAGCAATGTATGACTATATCATCCTCCA CTTCTTCTAAGTTCTTTGAGCCATCTTTTTCACCTCATTCATAATAAAATCATCCTCCTCTTCTTCTTCTCCTCTAGTAGTAGTAGTAGTATTA GCATCTGTGGATGATTTCTCCAAATCATTATCAATATTAAACCATGCATGTACTTTTGTCAAACTATTATCATACAAGCAAACTACAAACTTAT ATCACTTCATTAGTATTTACTTCAACTTTTTTTTCCTTTTGTTCATCATTTCGTAATTTCTTGCAATGTAGCATACGACACCTCAAGCGAAAGA TTTGCAATACAACTATCAGATCGACTGAGTTTTATTGTATCCGTGCTCCTTAAAGGACTATTTGGCATAGACCTTAATGCTCTTGGTGAGTCCA AGCTTCGCAAAACAATCTGTCTCATAGCCGCGATTAGATGAATCGTGGGTTCAGTCATCTTATTCGGTGGCCTAGATTCCTTGCAAAAGTTCAT AAGACGAGCCATTGCCTCTTTGGTGCTAATTAGCTTTTTGCCTCGGGCAATTTCGTCTTTTATAGCCTCGCTACATAACCCGCATATCCATTTG CCATTATATCGTTCTCGAATCTTGTATATGTACTCGAATGTACACTCTTCCGTTAGTCCGCAGCATTCGCACTTAGCAAGAATTAATTCCATTG TGGTTGAAATCAGAAATATATATATGAGCAAAGAAACTTGATCAAGCAATGATATATCTTCAAACACACAAAATGAGTTTTCTTTTCTTTTTTT AATTTGGTATGAACCTGAAAGGTAGAATGAACTTGTATAGAGATCTGATAAAATAGTGGCTTTGTTGAGAGGGAAAAGAAAGAA |
Primers for UN55959 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTGAGCCATCTTTTTCACCTC | 59.302 | 21 | TTCGCTTGAGGTGTCGTATG | 59.864 | 20 | 264 | 110 | 373 |
| 2 | TGAGCCATCTTTTTCACCTCA | 60.76 | 21 | TTCGCTTGAGGTGTCGTATG | 59.864 | 20 | 263 | 111 | 373 |
| 3 | CAAAGCTTTTGGCCTAGCAA | 60.5 | 20 | GGAGAAATCATCCACAGATGC | 59.503 | 21 | 157 | 53 | 209 |