Simple sequence repeat (SSR)
>UN55741 CTGTTGAGGCTTCTTTGAACTTTCTCCTCTACTTGGTGGTGGAGATTTGATAGGTGTTCCCATTCTTATTTGCTTTTGTCTCCTCTGTTTTTTC TCATATGCCTTTTTTGCCCTCTCAGGTGACAACATACCATGTTCCATCAGCCAAAACTCCGCCATTTCGCTAGAAGGTATCTGTTTGGACAATG ACTCATAAAAAATCCTAAGAGGTTCTCGCTCTTCTGGAACGTCAAACTTCTGGCCAGGCAAGGAGTAAACTTTCTTTTCTCTTTTTGTGACGAC TGTTGTTGTTTTGGTCTTTGATGAAGTCACAATCGATTTTCCTTTAGCCTCAGTAGAAGATGTAAATTTGTGTTTGGAAGAATCAATGGTAGCA CCACCAGAAACAACTCTGTGTTTGATAACAGATGAATCAAATTTTGTTTTCGAGTCTCTATTACTATTATTATTGTTGTTGTTGTTGGATTCTT TGAATCCCATGTTTGTGTTTTCTTTTTAAGGTTTATTGCACAGAATTTATAAGGTTGTGTTGATAAGTTTGATGAATGTTGAATAAAGTGGTGG TGTTTTTGGATCTGTTGATATGGAGATAGG |
Primers for UN55741 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCAATGGTAGCACCACCAGA | 60.112 | 20 | CAGATCCAAAAACACCACCA | 59.389 | 20 | 214 | 365 | 578 |
2 | TGGTAGCACCACCAGAAACA | 60.152 | 20 | CAGATCCAAAAACACCACCA | 59.389 | 20 | 210 | 369 | 578 |
3 | CAATGGTAGCACCACCAGAA | 59.566 | 20 | CAGATCCAAAAACACCACCA | 59.389 | 20 | 213 | 366 | 578 |