Simple sequence repeat (SSR)
| >UN55697 CGCTAACATAAATAAACCATACCCATTCATAAAATCTGTGATCATTAGTCACTACAAGTCATACATAGAAAAAAACATACAGTATTATACTTTA CATTGATGTAGGTGAGATGTTATTTCTAAAAGTTCACGTGAAAGTAGTACATAAAGCCCTTATAGTTTGTACTATTACATTGAAGACGGCTGCA ACAGTGTTGAAGTGGATGTTAGAGGTTCATGAACAACCGAGTTTGTTGAAACAGATATTGGGTTTCCTTGTAATTGCAGCATAATACTGCCCAG TAGTTCCGTCAGAATTTTTTTGAACTCATCTTCTTTGACTAGCTTTCCGTCATCCACATTAAACATCTTGCAGGATTCGGTGATAACCTGGTCC ATCTGATAAACTGCACCAAATGGTGGCAATCCAGCTGAAGGAGCCAAGAGATCGAGCGCCAGTCGCACACAGTCCTTGGAGATTTTCCCATTCT GATCTTTTGGTATAGACTTCAGTGCTGTATCTAGAGTCTTATCGAGCTCAAATTTGTTAGATAATAGCCTCTTGATGCCTGTTCCGTCAAAGGT ATTCTCACTATGAGCTACAATAACAGGCTGCTCCTTGAGACGTTGAGCCACAACCTGAGCTACCTTTTTAAACTCTACAAAGAACGTGTCATGA GAAGCAGGCTGCACTTGATCAACACCACATGCCTGTATTGCCGGTTCTATGATGTTACTTTTAACCCAAGAATCCAAAACTGGAGGCATCCCTT TATCAACTGTAAGTTTCTCAAACGCCTTGTTAATGTAGTCAGTAAGAGAGCCACCCGGGATATCAATTTCCGAGAGTATGGACATCATTTCTGG TTCAAAAGCTGGGCTGTCAACAAACTCAAGTAGGTCTTCGCCATCTATGCGTAGAATAACAATAGGATCTCTCTTTAATCCAGCAGCCATTCCT ATTAGAAAATCTGAGAGAACTTTCTTAAATTCGGTCTTGCTTACTTTACGATCTTTACCATGAGTGAATTCACTAAGAACCTGAGCATAAATAT GATCAGAATCAGAGTCAGAGCCTTGAGGAGGCAAACCTAAAGCAGCACCAATATCAGCAACAGCAGGTTGAAGTTCTTTAAGAGATAAATGACC ATCACAATCACGATCAAGATCACGAAACTTATCATCCACAAAATCACTAAACACTTTTTCATTCTCAACCAACTCCATTATGTCACTTCCATCC ATCACCTCACTTTTTGTCACATGTTTTGACCCTTCTTCCTCCATTCTTTTTTTAAAAAAAGTTTCTTCGTGAACCTTGTGATCACTGTGTGTGT GTGTGTGTGAGAAATATATGATTTGTGTTAGTAGTAGTAGTTAGTGAATTATTTGTAGTATTATTAGTTTGTGATGTTGAAAAAAAGTTTGTGA GGTTGGTGTGGCTATAAATGCACACAC |
Primers for UN55697 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTTTGACCCTTCTTCCTCCA | 59.641 | 20 | TAGCCACACCAACCTCACAA | 60.152 | 20 | 179 | 1246 | 1424 |
| 2 | CACTTCCATCCATCACCTCA | 59.473 | 20 | TAGCCACACCAACCTCACAA | 60.152 | 20 | 213 | 1212 | 1424 |
| 3 | TGTCACTTCCATCCATCACC | 59.318 | 20 | TAGCCACACCAACCTCACAA | 60.152 | 20 | 216 | 1209 | 1424 |