Simple sequence repeat (SSR)
>UN55469 GGATGGTGGACGACGGACGGCGGATGGCGGATGGATGAAACAATAATAATAATAATAAGTCCGAGATTGGAGAAATGATGGGCAACTAGCTAGC GCTTAGCTACCACTTATGGTCAGGTTGAGGTTGAAAGAATCTTGGTTGAATCCAAACACCCCATCGTTTGTGACGGCGTTTATCACGCCGCTCA TTTACAAACATGTTTGGGAACAGAAGTTGTTGATGAGCTTTGGCGGGCCGGAAGTTGTCGAGTGCACAGGCACAAAGGTTAAGATATTCGCCCT CATCCAGGTGAAAAGGGTCGTCGATGGTGTAGTTGGATTTTCGGTTGTGCTGCCTGAGGACTCCAAGAAAAGCATCTTCAACATAACGAAAGGG CAGACCGTCATGTATATCCTTGACAATATCGTTGACAGGGTGATTGATGACTTTGCAATCTTTGAGAGAGAATTTGAGGACGCATTGCCAGTTA TCCACGTAGTAGAAAGTTTGAGTCTTGTGGTTGAATCCTGCACAAGTCATTGAGGTATGAGCGGGCCACTGACAGCTAATATCATTGGGAACCT CGTGGCGAGTCCAAGTAGTTTGACCTTTAGAAATGACGAAAACCTCGTCTGGCGTCCTGATGGAGACGATACAGTGAGCAGAGGTGGGTAGGTC GGAAAAGGCAGTGGCATGGTGTTGGATTTGGTTGATTGGGAAATCGGGGAGAACGATCTTGGCTTGAGAAAATGGTGCAAAGAAGAAGATGGAG CGTTGTTTTGGTTTGAAAACAAGGACCCAGCCTTGATATGACGCGAGGAACATACAAGCTTTGAGATCAGGAAGGTCGATAATGTACGGATTTG ATCTCCGCAGGGTGTAGATGAAGCACTTTCCGGCGGCATGTGGATGGTGAGCTAGTATCAATGGCATTCTCCAAGATTCAATCGAAGCAGATGC ATCACGGGAAGCACGTCGGAAATCCTTGCAGGTGCCACGGAAACTTAAAAGCTCGAAAATATCTAATCGATCAGCAATAGAGGATAGTATATCT GTGGGAAGATCAGCCCATGCTCTAAACCGTTTCATTCTTTTTTCTTTCTTTGTGCTTAATTAGCTTGCTGCATAAATAAATTATTAAGAATCAA ATTAACTGCTGGTCTACTCAATCACAAATACAAT |
Primers for UN55469 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGATGGTGGACGACGGAC | 62.453 | 18 | AAATGAGCGGCGTGATAAAC | 60.103 | 20 | 191 | 1 | 191 |
2 | GGATGGTGGACGACGGAC | 62.453 | 18 | TGTAAATGAGCGGCGTGATA | 60.237 | 20 | 194 | 1 | 194 |
3 | GGATGGTGGACGACGGAC | 62.453 | 18 | GTGATAAACGCCGTCACAAA | 59.59 | 20 | 180 | 1 | 180 |