Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN54737
TTTTTAATCAACAAATAAATGAACACATTTCATAAATATAACTATAGTTCCTGTTTCCTTATTTTTACACCAACATATACAACAATATATATTC
TCAAAAATCAAAATCATCTTGATTCGGCTTGGGCGAAGTAAGCAAAGCTGCATAGAGTCTTAATCGGTCCTCCCCAAGCGAAGAGCATCTTGAT
AATGGTCTTCTTGGCCTAATAAACGACAATGAGGTCAAAGTGAGCCTATGTCGATATCTCCTCCAAGCCAATTGAATGGCAACCGCTGCCCAAG
TTCTCCACCCAGGAGAATAATATCGTGCACTCCTCTTTACCTTTTCATTTACAAATGTGTATCTAAAATGTTGTGTAACGTATTTTACATCATC
GGCTTCTAGCCCAAAAGCCTCCGTTGTTTCAAGGGTCACAAGTGTTGATGATGATGGAGGTAACCTTTCAATGAAGGGTCGCCTAAGGCACCAT
GATAAAAGCTCGTCGCCGCTAAAGTTTCCAGGGCCTAACATGCAACAACTTTTAACACCGTCTCGGAGAAATTGACTACTTTGGAGATGACCTC
TTACTATGAACAACATTCTTTGTACAGGATCACCTTCTCTTGCAATAGTTTCTCCCTTCGTAAAAATAAGGGATTTCACCCGGTCACATATGTT
CTCGAGTACTAAATTGTCCATATGCTGAAATAGAGGCACCTGTCGAACTAAGTCCAAGCAAAGATGATACTTAATGTCTCTCCGTAGGCCCTCA
GGGAGATTACGTATCATCTCACATTCATCTACACCACGCATTGCAGCCCATCGTTGCCTCTCATAGTTCCTTACTCTTTGTCGGTACCGTTGAG
GTAGGTGCCTCCTCCTCATCCACCACTCTATATTCCTCATTTTCAATTGCATAGCTTGTTTCTTTGATGTTGTCGCGTGTAGAAAGACCTTTAT
ATTTCCTATCAACATAGTGACTAGAAGGAGCCCCGTTGTGAGGACGATTATGATAAAAAGAACTTCTAGCCAGTCCGTTGTGCTCTCCAAGTTC
CCAAATGTACTTAGTGTCATAAGTCCCCAAAAAATGGGAAAGAGTATCTTTTCCAAACGGCTATCATTGGTAACAAGTTGAAGAGTCCATTTAT
AAGCTCCATAGCTAAAACTGTCTTCGTTCTCAAGGCAAGCTGACCGTGCCTTAGTATCCGAACTCCATGAAAGCCTGGCTTGATCATTCCTGAA
GTTGTTGGTGCCATAATAAATAGGGTCTTGACATGTCAAAAATCTAGAAAAACAAAGTCCGTTTGCTTCCATACATTTTTCTTTCAAGCATTTT
GCTGCCCTTTGTGTGCCAAGCAAGTACCAACAAGCTCCTACAGCATGAGAGGCAACAAAGTATGCGATCAAATTGAGAGCGATACCCCACCAGA
CGGTACCAAATATGTATCCAGATAGATTTTGCATTCGTCGCAAAAGACATATTGAGTGATATATCTTCGGTAGGTATTGGAATAGAAACATGAT
TAAAGCAATTGTCATTGTCTCCGTCGTCGAACCTTTCTTTAGCAAAGCCGGGATCACTACCCATAATACTACCTGTGGTATAGGAAGGATAACG
AATAGATCGAAAAAGAAGCCTTTCTTAGCTTGGCGTATGATCCGAGCCGCAACTTTACGTGCAATACCGCCATCATGGTTTAAGCCACGATGGT
GATGAGGTGACCTCCACCACCTGCTCATCTTAAGCTGCAACCACATGTTCCACACGTGCAAAGCATCCGTCACACTCCGTAAAACAGTCACAGT
AACCGCGAACCATCCATCCACAAACACACACATGCATGTCTCACTTATGGAGAATGTGTAGAAGAAAAGTGGATCAATAAACAAACCAGTAGCA
CATACTAAAAGGAACACACGGTTCCAGTCTTGAAACCATTGGGATCTAGGGTCTAGATTCACTCTAGCACGTGCAGGGCACCTGCTAGAGATGT
AATCCATGCATTCTTGTGACTTATTAAGTTGAAGTGCTTCTTCTTCTTGAACGTCTTCATCTTCTTCTTCATCATCACTTGTGGTATCAGTGAA
AAATTCATCAAAGTTATGGCTGCTAGCCATGTTACATAAGTGTGTGTTTTTTCACCTTGACAGTGTGTGTGTGTGTGTGTATGTGTGTTTAGGG
ATGGGTTTATGATTTGAGTCAGAAAGTGGGCAGAGGGAATATATGTAG

Primers for UN54737 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GGGCACCTGCTAGAGATGTAA 59.3521ATTCCCTCTGCCCACTTTCT 60.07420247 19562202
2AGGGCACCTGCTAGAGATGTA 58.97221ATTCCCTCTGCCCACTTTCT 60.07420248 19552202
3GGGCACCTGCTAGAGATGTA 57.92220ATTCCCTCTGCCCACTTTCT 60.07420247 19562202