Simple sequence repeat (SSR)
| >UN54716 ATATACGATACATGATGCAAGTGTACAGACAACAAATGAACTTTGAAAACCAAGTAACTTTCTATACATATCAAAGACCCGTGTAATAAATGAT ACATACAACATCCTACAGAAGGTAATCCATTTGCAAGATTACCCCTTTTCCAGCTTTTTTCTTTCTAAGTTCGGGTTTCCCCATACACATTTAT ACATTGAACCATAAACTACTGTACACAGTTTCTTCAAATCACCAGAATTCATCATCATCATCAACGGCCGTTAAAGGAGGTGGGTGTCGATCTT CTTCCTCAACCTCCATTTCCAATTCAGGCGTTGACCCAAACTCAGTCAACTCAATATCAGCAAGATTCTTCAAGTCAACAACCGAAATCTCATC AAGCCACCTTACAACTAAATCAGCAGCAGTAAGCTCATAAACTTTATACTTGCTAGCAACAGCCACACACTTCATTTTAGCATCATGAGCCGCT TCAACTGTCAAGTTTGAATTACCAAACACGATGCACCGTTCGGGTATAAACTGCAAAAGCTGAGCTGCATAAGCAAACATCTCAGGATCAGGTT TCCCTCTATAA |
Primers for UN54716 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | AAGTTCGGGTTTCCCCATAC | 60.053 | 20 | AGGAAGAAGATCGACACCCA | 59.655 | 20 | 128 | 161 | 288 |
| 2 | CTAAGTTCGGGTTTCCCCAT | 60.18 | 20 | TGACTGAGTTTGGGTCAACG | 59.72 | 20 | 172 | 159 | 330 |
| 3 | AAGTTCGGGTTTCCCCATAC | 60.053 | 20 | TCAACGCCTGAATTGGAAAT | 60.448 | 20 | 156 | 161 | 316 |