Simple sequence repeat (SSR)
>UN54645 TTTTTTTTTTTTAACAGCAAACTAATAAAACTTCATTCACCATTAAGTAGCAATTACAACCATTGAGTATGAATTAAGCAAACAATTCACATAA TTCTTTTTTTTTTCTTATTTTTTTCTTATTACATTTTATTTCAACAAAAGGAAAACCACACTCATGAAAGCTCACTCTCCATGTTTACTACTCC ATCGAGCGAACTAGTTAATCACTGTCGCTGCTGCTACTGCTGTCATGACCATGACCACCCTCATGTCCCTCCTTCTTCTTCTTCTTCTCCTTCT TTTTCTTCTTCTCACCATCACCACACTTCTCCCCATCTTTCTCACCAGACTTATCTCCATGGATCTTGTCCTTGATCTTGTCAACTATCCCTTC TTTCTTCTCACCCTCCTTGTGCTCAGATGACTTCGAGTCATGACCACCTTCATGCTTCTTGTGATCATCAGCGCATTCGGCCTCGTGCTTCTTC TTGTCCTCGTCTTTGTTGCCACCGATGTGGAGTGCGTCTCCGATCTTGTTAATGATTCCTGCCATTTT |
Primers for UN54645 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TAATCACTGTCGCTGCTGCT | 59.77 | 20 | AGATGGGGAGAAGTGTGGTG | 59.962 | 20 | 117 | 204 | 320 |
2 | TAATCACTGTCGCTGCTGCT | 59.77 | 20 | GGGAGAAGTGTGGTGATGGT | 59.817 | 20 | 112 | 204 | 315 |
3 | TAATCACTGTCGCTGCTGCT | 59.77 | 20 | CTGGTGAGAAAGATGGGGAG | 59.649 | 20 | 127 | 204 | 330 |