Simple sequence repeat (SSR)
| >UN54588 AGACATACATTCACAAACTAAATTTGGTTTTTGTATAGAAAAAACTAAAGCAATCTTGTTCCTCTATAATTTCAATATATAGATTGTTCTAAAC AGAGGGGAAAATATATAATGCAACATATGTGTGTTTCAGCAGAGTCTTGCACAATGATTGAGACGATAAAATGAACCAAGCCTTTGAAGAAGTG AGCTTTTTATGGCGACAGCACGAGTACCTGCTCAGGAATTTGAGATTAAACTTGTTTAGCTCTGTTTTGACTTCACCCACTCGACGAAGTTATC TAGGATTAAAGGCCAAGCAAGTTCCTCGTCATAATTGTTGAAATCTGGAAAACTTATCTCATGGCAGAATCTATAGAACCCCATCCATTGATCC ATATTTATGACCTTGTAATCAATCTGTGTCTTTAAATACTGGATGAACATATCCACCTGCTGATGATACTGTGAGCCCAAAACAAGCTCCAATA ATTCACATATGCTTTCAATATCTATGCTCTTTTGTTTCTCCTCTGTTAGGCAATATCGAAATGCATAAGAATAGAAGTCCACATAATTTGATGG CCTACGGACCTCGTTCTCCAGCTCAGGAAGCGCCTTCTTTAACTTAGCTATAGTATCTGCCCGTAAGGCTTTAAGACCTTTCCGCCACTCCTCC AGCGTGAAGTATCCCTGCTTTTCAGCCTGCATTTTCCAAGCAAGCATCAATATACGGACATCCGTATGTTCGACTTCTAGGTCAGAACAGAGAT ACTCTATTCCTTCTGGGTCAATCATACCAGAAGACTCATTCGCATATGTATAGTATAGCTGATCAATACGCTCCAACTCCTTGGTTGCAGCTTT ACCTGTAGCAGAGCGAAATAGATCCATAGGAGAAGAATTAGAGGAAGAAGTTGATGGGGCTTTCTTTGATGAACCCCGTCGCATCCTCAACTTA TTCTATCTTTTTATTTATTACAACAACAACATATGACGTCGATGTCCGACAGCGATTGAAGATGACCGGAAGTGAGTCAGAGATTGGTTGGATA CGATACGATGGTCGGTCGGTTGGAGTAGAGACTATCCAACCCTCAAACTCTCTCTGACTCTGATGATGATGATGATGTTGAGATAGTTTGATAC ATGGATCTCTTTGTTACTACTAC |
Primers for UN54588 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GATGGGGCTTTCTTTGATGA | 60.014 | 20 | AACAAAGAGATCCATGTATCAAACT | 57.403 | 25 | 245 | 899 | 1143 |
| 2 | TGGGGCTTTCTTTGATGAAC | 60.051 | 20 | AACAAAGAGATCCATGTATCAAACT | 57.403 | 25 | 243 | 901 | 1143 |
| 3 | AGGAAGAAGTTGATGGGGCT | 60.074 | 20 | AACAAAGAGATCCATGTATCAAACT | 57.403 | 25 | 256 | 888 | 1143 |