Simple sequence repeat (SSR)
| >UN54189 CCCGCATATCAAACAATTCAACATACGATGATTTTCTCATATATCATTATACATTCCTTTAATAAGCCAAAAAAGAAACAAATATTTATTATTG GTTACAAGAATTATTGAAAAGACAAAATAAAAATTTACATAGAACAGTATGCAACCAATAACCTAGCGGTAACCGTCTCTCCTGTCTTGTTCCT CTGCCTCCTTATTCGCAACTTGAACAGATTTGAACCAAAGGTAACCAGCAGATGGAAGACCAGTAATAGCAAAGAACCCAAGCACAGGTGCATA AAATATACTATCCGATTCCAACACTCCGAAAACTGGCTTTTGGTTCACATACTCAAACACAGACCCAATAGCGGCAATGGCAGTAATAGCAGAA GCAAGCAAATAAACACCAAATGGAAGATCACCAGTAGAAGAAGATTCTTGTTGGGTTTCATTCCTGGCCCATGGAGGTGGTTCATTGGAATCTG GTTTGGCCCATGAAGGTGTTGATTGTTCTTCTTCTTCTTCTTTGATAGCAAATACAGCTAGTCTTTTGTAGCATTTGTTGGGTGTTTTGTGATG TGTTTTGAAGGTGGAAATTGTGGATGTTTTGAGGGGTTTTGCGGAGGGGATAAGAGGTGGGTGATTGTGATTGTTGCATACAGATAATGCTTGC ATTGTCATGTTTCTTCTTATTGAATATTGTAAATTAAGATGATTGACAGTTGAGTTGAGTTCAGCTTGGTTTTGCTGAATTTGTGTGTTAGATT GTGTTTGAAACCGTTGGTTCTAAAGAATCTCCTACCAAAAAT |
Primers for UN54189 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GGTGGTTCATTGGAATCTGG | 60.173 | 20 | ATCACCCACCTCTTATCCCC | 60.015 | 20 | 178 | 452 | 629 |
| 2 | ATGGAGGTGGTTCATTGGAA | 60.173 | 20 | ATCACCCACCTCTTATCCCC | 60.015 | 20 | 183 | 447 | 629 |
| 3 | AAACACAGACCCAATAGCGG | 59.993 | 20 | AACCCCTCAAAACATCCACA | 60.21 | 20 | 266 | 337 | 602 |