Simple sequence repeat (SSR)
| >UN54163 GGGCATAGCAATCATCTTGTTATTACTTGAAGATTATCAAGTTTAATAACTTAGATACCAATAGCACAAATAATGCTACTATAACCATAATAAT AATCGTAATCATAAACTTAAACAATTACTATACCAAACAAATATGTACGTGTGATTGTATCCAGATCAATCAAGAACAACAAGTTGCACATCTG ATCAACCCATTCTCATTGCAATCCGGGCACCTTATTGACCTTCCTTCATCTTCCTCAAACACCTTCCTACTTCCACTACAATTCGGACAAGGAA CAAATCGTGCATCACCACAACTATCACAAACAAACCCCGGATCAATAACACGAAACCCCTTCATATAATCAAACAATCTTCCATCCTCATGAAG CCGTTTTATCTCATCCGCACCACCAATATGCTCCCCCCTAATAAACACTTGTGGCAAACTAAACCCTTTCCCATTAAACACACTTTGCAACTCC TTCCTATAACTCGAATCCATCGAAATATCCCTCTCATCGATAAACACACGAAATCCTTTCAATATCAAACGAATTTCGCAACAATCTTCGTATG TTTTCCTAATCCCTCTCAAACTTGTATAATACAACACAACTCTATCTTCACAACCTTGTAGAAAACAACCCTTTTTTCCATTCATTCGCTCCAC ATTTTCGCTAACTACTACTTTAGAAACCATTTTCGAATCCATTTTAGACAACGCCTGATTATAACTATTAACCAAATTCGAATCCATTTTCGAC AACAAAGATTCCTCAGATAAATGCTTCCATAATGGCTTAGTATCCTTAGCATCCTTAATATCCGAAAACTGAACCAATTCATAAGGATCACCCA ACCCAAAAGAAACATACATTTTTTCTTTCGACCCATTACATATTTTTCGTTTATAAGAAATGGGTTGCTTTCCATTTAGCTCAATTATATCATA ATCATCATCATCATCTAATCCATCCATTAACTCCCATGTATTAATAACAGAGTCAGGTGATGACACATCTTGTACCTCTTGGTTCCCAATGTTT TTAACATGATTTTCAATACTAGGACCATTAAGGTAACCATTTAATGAGCCATAAGTAGTTGAAGTAAGTGAAACAAAGTGGTTAGAGTCACCTT TGCAAAGTGGTGGATGATGGATCAAAGGTGTTGGTAATGACATGGTTCTTGAAACAGGCGTTGTTTGTGTTGAAGATGATGTGTTGTTGTTGTT GTTGTTGTAATTGCGTACCATTCTTATTCATCGTCATATTCAGGTGTACCCCACACACATCTTCTTTCAACAATTTAATCTTCAAGCCCTGACT TCCAATCTCCTCCTCATTTGTTGATGGATTCCATATACAGATT |
Primers for UN54163 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGGGTTGCTTTCCATTTAGC | 60.074 | 20 | CCTTTGATCCATCATCCACC | 60.135 | 20 | 250 | 907 | 1156 |
| 2 | AAGAAATGGGTTGCTTTCCA | 59.546 | 20 | CCTTTGATCCATCATCCACC | 60.135 | 20 | 256 | 901 | 1156 |
| 3 | TGGGTTGCTTTCCATTTAGC | 60.074 | 20 | CACCTTTGATCCATCATCCA | 59.296 | 20 | 252 | 907 | 1158 |