Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN54138
TCTAAAACTGAAAACATTTAACCTTTTTTCTAGTAATCTAAATAAACAACTTACTATCAAGATCAACATGTTTAGATGAAGTAATTCACAATCA
AACAAAAAATATTCTTAAAACTAAGAAATCTATGTTTTTTCTGTCTCCTCAAAACTTGAAATTATTTTAGGTCAGCCCATCTCAGTTCGTTTTC
TTATCCTCTGCACTAGTGCCTGAGGTCAAGGCTGCGGCTGCTTCATCCTCGTCCTCCCCACCAAAACCAAACTCATTCACTCTCTTTTTGTCCA
CTGGATAAGCCCATCTTTGATACAAATATATCAAAAATATAACATCATCACGAAAGACAGAAAGTCGATGTAGCATTGGCATTTTTATCACAAA
GGCGAAGAGATCATCGATAATTGTGTTCAAAAACTTGTACGTCATTTGCCTCCATGGCATATGAGCAACTGATTTTAGCTTGTAATTGATGAAC
AGCTGTGGGCACATCATAATGAAACCGAACATGTATACACAGCTTGTAAGTGATGAGAGAATCCAGGAGTACCAACTCTTGTGGGTTTCATACA
TAAGTGAATATACAGAGGAACAGCCAACAAGTACAAAAAGTACATATGACAAATACTTCATCGCAAGATCATCGTATTCTTTTGTCTTGTTTCC
TGCATACGAGTCTCTATCACTGAACTTTAATTTAGGTATGCTACCACTTCTATCAACCTCAATGTGCATTGCTTTCCCTATTTTCCAGAACTCA
ATGCAGACACCAACCCCAGAGCTTGCAAGAATCATCCACGAGGTATCATTGTCCAATAAGTAAAGGAAGATAACAAGCTGACATATGAAGCTCA
CAACGACTGATTTTGCAGAAAGCCCTTCCATAGATTTGTTTTTGTTCCAGAATTGTATATCGTTCTTGAATGCCAAAAAGTCGAAGACCGAATG
AAGCAGTGAAACACACATGGTGATTCCCAGGAGATAAGGATTTCCTTCCACGAATACCCTCTTAAGTTCATCAGCCTCTCCTTCAAGCATACTT
CCATAACTGCGATGAATTTGGAATGACTGATCGATTTGCATAAATAGCTGCCACTTGGTCATGCTTATTGGGGCCACCTCTAGATGTAAATCCA
GTTCCTTCACTGTATCATTGATTGCTATAAGCTTATCTCTGAGTAACCAAAATTCATTGAAGAAGACCGTTGGATAATAGTTCCCTGTGGTAGG
TTCAATATTCATGTATGGAGCAACATTAGGTGGAATAGACCCTTTTGAGTACTTCGTAAAATCGTCAACCAAGTTAATCGTGATATTTGGTTTC
CAATATGAGATGTACTCCGTGGGACCATCATCCTTCGAATCAGCTTCAGGTTCTTCAACACCCTCAGAAACTGCTTCATCCTCATTAGTGCCTT
TGGAGTTCCCCAAAAGGCTCTTCTTTTTGTTTGCTTTTGCCTTGGGCAAGTATGTCACCACAGGATGTTTCAGTGCAAAGGCAGCCAAAGGCTG
ATACTCAGGGTCATTTGGGTCTACTGGAAACCCTGAACGTGCAAAGAAGACATGCGCAAAAAGACTCCCGTTATGCTTCAAAGCCTCAGATGGA
TGATACTTGAAAGAAAGAGTCCTGGTGCTTTCTGGTTTCCATACTGCATAAGGTATGTTGGATTCATGCCATATAAGTGCGTCTTCATTCCCAA
AGTCATTAAACTTGTCATGTTGAGATAGATAAAACCACATATCGATAGATTCAGATTTTTGAAAGAGGTTAGAGATCTGGACAGCAGGACCGGA
ACCCGAAAGGGGTTGTTTACCACCAGAAGAAGAAGAGAAAAACTTGGAAGCAAAATAATAAATAACAGCTATTCTTATGATCCCTGTGAACATC
TGCCCAATCCCTTGCGGCTGCTGTTGTTGTTCTCCGTCTCCCTCCGCCGCTGCTGCTGCTGCTGCCGGCGGTGCCATATTGGTATATCTCAGTC
AGTCCGTCGGTCGGGTGGTTTAACCAGAGAGAGAAAAAGTAAAAGAGAGATGCAATCTGCAAAGTGAACAAGGGGTTATGTTTTAT

Primers for UN54138 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1ACCCGAAAGGGGTTGTTTAC 60.08920ACCCCTTGTTCACTTTGCAG 60.14920264 17872050
2TGCTGTTGTTGTTCTCCGTC 59.8820ACCCCTTGTTCACTTTGCAG 60.14920152 18992050
3ACCCGAAAGGGGTTGTTTAC 60.08920ACCGACGGACTGACTGAGAT 59.71320199 17871985