Simple sequence repeat (SSR)
| >UN53846 ACTGGTGACCCTATTTCAGTCAGAAATACATAAAACATGAATAAAAAATACCAACAGTTTAAAAGCACAATAAACAGATACCGTTACAAGTTAG AGCTCCACTCTTTCAGAATATTTTTAATAAAAAGAACAGAAACCAAGAAACGAACAAGACAAAATACTAGAGAAGCTTTTTGTACAACTGATAA AAACTATTCCATCAGTCTGAGTTTTTTCAGAAGCTTGATGAAGGATTTAAGTCTGCATGGCATGATAATTCTCCAGTTCCTTATCAAGTTCATC AGCAGATTTGTTAACTGCTGGCTTCTTCCCTCGTACACGCCCACGACCACCACCTTGTCCTCGCCCACCACCACGGCCCTGCCGAGCACCACCC CGTTGCCGAGCACCACTGCCCTGCCGAGCAGCACCACCCTGTCCATTCATTGTGCCACCACGACCGTTCTTTATGGCACCACGGGTTTTCTGAC CAGATATACGATTAAATGCTGTACCTCCTCTTCCACGGCCTATTCCAGGCATCATCACTACTGTCCTCTGCCCATTCACTCCTCCAACAACATT CACACGAGGTGCAAGAGGAACATCGGACTTGGAGCCAACGATTTCAATCTTCATCGGCTTTCCATCCAATTGTACATTATTATAACGTTTGCGC GCTTGGAATGCATCACTTATTCGTGCAAACATTACTTCTGCTGTCCCATTTGGACGGCCACTTTTGTCATAATGAATTGCATATCTTTTCAGTT CCCCAATTTCAGAGAACAGCTCCCTTATATCTTCATTTGTAACTCCAATGTCCAAATTAGAGACATACAATTTTGCACCATCATCCAACCCTGG TAGACCCGTTGCTTTTAGGCTCTCTTCTAACAAGTCACGTTGCCAAGGCATACTCTTGGGTCTGCGAAAAGTCTTGGCAATAGTCTGGGCTGAT GGCGGAGCATTCACCCTGAGGGAACCTTTGCGAGGTTTCCCTGTTGGTCTTCCATTACCAGACGAACCTCCTTGTCCTCGCCCACGGCGGGCCT TGCCTCGCCCTCCACCTTTCTCAGCTCTCTCAGTAGTGCGTCTGCTTTTTATGATATCCCCAAGTGACATATCCAAAGATGCCATTGTATGGAA GATTCTGCAACCGTACTTTCGGATATATATATATCCTGAACTACGATAATTGATTACGAAAAATAATTGATTGCAGAATGATGATGAGGAGTAG ATCGGATATTTTGGGGGATAAAATTAGGGTTTGACTTGATAGATGGATGGATGGATGAGATTTCAAATTTCCGGAAAAAAAAAAAAGA |
Primers for UN53846 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GTTTCCCTGTTGGTCTTCCA | 59.943 | 20 | TTATCCCCCAAAATATCCGA | 59.078 | 20 | 269 | 975 | 1243 |
| 2 | GTTTCCCTGTTGGTCTTCCA | 59.943 | 20 | TTTTATCCCCCAAAATATCCG | 59.868 | 21 | 271 | 975 | 1245 |
| 3 | GTTTCCCTGTTGGTCTTCCA | 59.943 | 20 | CCCCCAAAATATCCGATCTA | 58.712 | 20 | 265 | 975 | 1239 |