Simple sequence repeat (SSR)
>UN02482 CTAAAAACCGACAAATAAGACAATATCGCCGTCACGGGCGACCCAGTCATCGTATTAAACTGCACCATAACATCACCATACCTCGAAAAAACAT AAACGTTACCATGATCATCACCTACACCAACGTACTTGCTCAACCCTTCCACGTCCTTAAACGGCAAAACATTCAAAGACGTCGCTTGCGTATC TATTTTCACAGCCGAAACAAACTGAAACCGTTCCGACCAAAACAAACTATGTTTCGTAACAGAAACAGCCCTTAACTTATCACCCTTAACCATA CCCACATCATCATTTTCATCCCTAAACCTAGTTTTCTCCCCTTTATTCGACTCGGTCACTCGCTTAACAACATCATCATCATCATCATCATTAT TTTTCCTCTTCAATCGGTCGCAGAAGTTATTTACTGAAACTTCTGTCTAATTGGGCTGAATGTCGACCTGCTTGGATGTTTCCGTTACCATGAG GATTCAAGAAATCCGTATCTGCTGCCAAGTAAGGTGACCTAGAATAGTTGTCCAGTATATCTGAACTAATAGAGAAGTCGGCCGTCAAATCTGA CAGACTGAAGTTTCTAGGAATCTGGCCCAAAAATCCAAATGACGACGTATCTGGTTCAACAATCGGTTCATTCACAGGCTTCGGATGAGATTCT TCGCCAATAAAGTTAGGAATGGGTACCTCTGTCATTGCAGGGGGCCTATCTATACCATTGTTTGCAGCATTGTACATAAATGAGGGTTCTCCTG GATAACCAGATTCTGATTTAATCACCCCTCCACCATTCATTCCTTGCATAAGTCCCATACTTGAATTCTGAGGCATCAGTAAATTTTGTGATAC ATCATCCCTTCTGGATAAACCGGACATACCACCAGCAGATTGCATAGCTTGTACCGTATTATCTGGGGCATAATTTTGATGCAATAGAGTATTA TGAGATCCATTAGGAATAGGAACTGACGCTGCTCCTGGGGCAGAGGATATCTGACGCATCAGCTCAGCCTGTGTCTGAAGCAACTTATTAAATT TCATTATTTGGTCCTTTAAAATCAATCTCAAGTGATAAGCCTTGAAAAAATCCTGATTTTCTTCTTCAAGCTTCTGCCAAACAAGTTCAGTGAA ACTAGGTTCTATTTTTGCTTGATGCAGTAGTGTACTAACAACTTCCTTCTGGCTCATATAAAGCTGAAGACACCGTTCTATAAGATTTTGTACC AGTTGTAAATCTTGAGGCGAAACCTTTTTAACCTCCCCACTAGACATCTTCCTCTAAAACCACGCTTTAACTTACAAAACAAATTTAGTAAGTT GAATTGGATTAATTGTTGGGATCAAAGGTTTCGA |
Primers for UN02482 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCCTTTATTCGACTCGGTCA | 60.066 | 20 | TGACGGCCGACTTCTCTATT | 59.836 | 20 | 237 | 321 | 557 |
2 | CCCTTTATTCGACTCGGTCA | 60.066 | 20 | TTGACGGCCGACTTCTCTAT | 59.836 | 20 | 238 | 321 | 558 |
3 | CCCTTTATTCGACTCGGTCA | 60.066 | 20 | CTTGGCAGCAGATACGGATT | 60.235 | 20 | 179 | 321 | 499 |