Simple sequence repeat (SSR)
>UN53352 CTTGGATGGCATTTTTATCTGTATCGATCTTCTCAAGAGCTGGTATGCAAAAGGCTGCTGTCTTTCCAGTTCCATTTTTTTGCTCTAGCAAGAA TATCACTACCAGTCAAAGCAATAGGAATACTCTCTTCCTGTATAGGGGAAGGCCTTTCAAAACCCTTTTCATATATTCCCATAAGTAGCTCCCT TTTCAGAAAGTAGTCCTCGAATTCATTTCCTTTCGTGGCTGTGACATCCTCAGTCTTGTACCGGCTATCTGCTGCAGGTATGTTCAACTGTGCT TTCCAATCTTGAGAGCTTGAATCAACAGTAGTGACAGTTTTCTCAACTTCATTAACATTGGAACTGGAAGAAGAAGAAGAGCCAGTATTAGCAC TAGTATTAGGGTTCAATCTTAACCACTGTTGTTGTTGTTGCTGTCTTTGTTGGTACTGTTGTTGCTGTGGTTGTCTCTGTTGGTACTGTTGTTG TTGTTGATATTGTTGATTAGGGTTTCGTGGTTGTTGGTAATTATTAGGGTTTGTTTGGTACTGATAACCACCACCACCACCGCCGCCGCCGCCG GGATTAGTGTTGTATCCGCCGCGGTTGTTGCCGATGCCGGGAGGGTACCGGCGATTGTTGTTGTTACTGTTGTTGTTGTTCATTGAGAGATGAT TTTTTGCTGTCAAGTTTTTGTTTGTTTGTTTAGATCGAGAGTTGTGTTTGGGTTGGGTGTAGTGTCGC |
Primers for UN53352 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCTGTGGTTGTCTCTGTTGG | 59.31 | 20 | GCGGCGGATACAACACTAAT | 59.988 | 20 | 147 | 440 | 586 |
2 | GGGTTTCGTGGTTGTTGGTA | 60.647 | 20 | CCCAACCCAAACACAACTCT | 59.861 | 20 | 226 | 490 | 715 |
3 | GCTGTGGTTGTCTCTGTTGG | 59.31 | 20 | ATACAACACTAATCCCGGCG | 59.845 | 20 | 140 | 440 | 579 |