Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN53135
TAGTGGAACATACAGTTCAACATAGATGACAAATTGACAACTACACACATAAATGAACACGTACATATGGTCTGATTAACACAACAAGATAGCC
CAACTACGATATCTAATCCAACCAAAACGAGGTACGAGGAGCAAGGAAATCCAACTATGCTAACATATTTGCCTACACAACTAGAACTTTTTAA
CAATCTAATCGAACGACACTTGAACATACGAAGATGCGTCTGATAGCGGAAAATGACTATTAACGATTCTTTCTAAGTGATACTTTGGTCAATT
CGACTATTTTGTTCTTATCACCCCATTCTTGAAAGATACGTGAAAGCATGGCAAAGAAGTAAGCAAGTGAACACATGACTCGCGACAAAATATC
AACGAACCAATCTTTATACGTCTTCTTTGGGGAATGAGTACGATCTGACTGTAATATAGCTCGATAAATTGCCTCAGTCAATGCAAAATACGTC
ACTGGATCAGCTTCTTCGGGTAGTATGCCTTGCTCTGTGAGGCATGCTATGTCATATACACCTGTTGTTACCGGTATCCCAAGATAGCTACAAA
TTTTGATTCTGCAATTTAGCCTCTCCATGGGTTTTAGCATATCGCCATGCGTTAAGATCAAGAGCGGGTCTGCATTTGAAGTCCTTATGGAAGG
ACAATGAAAGAGGGATTTGATAGCCAAAACTCGCTTAAAATCCCCTCCGCAAAAAAACGCCTTGTAAACATCTGTTAAATCAACCACCATAACA
ACATAGTTCACCTTCCGTTTCACAAATCCATCAGATGAGCAATTCAAACTCGTGTCCACAACATCTTCACCGAATAGACACAGTTCGTTGTGAC
GAACCCCATCTGTCATCCACCGTGTCACCTCATCCAAGCATTCTCCCATTCGAGTAAAATCTAGTCCCTTTGAATCGTACACACAAAAACCATT
GCGTGTTGATCTTAAAACATTATGCTCTTCCAGTATCATTGTTGAGTATTTGGATGATTCATTTGAAGTCTGAGAAAACGGAATGAGTCCAGAT
CTTCCAAGAACACTATACATAAGATTAACAAGCGAGCTTTTACCCGAACCCGATAAGCCGATCAATAAAACAGTAATTTCAGATGGAATATCCA
TATTCTCCTTCTTAAGCCCACCAATAGGAAGCCAAAAATCACCAGCTTTGTACACCATAAGCTTATGCTTAAGCTCATCTAACCCATGTTCACT
TATGGAACACAAACGTTCCATTTCTCTTAAAACCTTAAATATCGACAAAGATGATGATGATGATGGTGTTTTAAGTGAAGTGAATTCTGGTATT
GTTTTCCACCAACAGAATCTTGTGTTTGGTTCTTGATCATTTTGCTGATGAGTTTGTGTCATTGTTGTTTGTGTTTTACGTTTGAGTTTGGTTA
TTTTGGTTGAGAATGTGGTATCATGTGCTAAAATATAGTAAGTACTCCATACAATACTGTTGTGTGAAT

Primers for UN53135 SSR

Primer pair	Forward primer (5'-3')			Reverse primer (5'-3')			Product
Primer pair	Sequence	Temperature	Size	Sequence	Temperature	Size	Size	Start	End
1	CCACCAATAGGAAGCCAAAA	59.931	20	CACAAGATTCTGTTGGTGGAAA	60.008	22	195	1146	1340
2	CCCGATAAGCCGATCAATAA	59.886	20	CACAAGATTCTGTTGGTGGAAA	60.008	22	258	1083	1340
3	CCACCAATAGGAAGCCAAAA	59.931	20	CAGCAAAATGATCAAGAACCAA	60.11	22	218	1146	1363