Simple sequence repeat (SSR)
>UN52340 AGGCGGGGATGATTTCACCTGAAGATCCTTGATATCACTTCCACGAAAGAGTATGTACTCGTACACCTTGTCACTAGGCATGACCTGTGGACCA TCTTTTTTTCGTCCTTCAGTTCCAAACGATCTAACGTTGGTTAATCCGATAGAGGATTCCTCAGTATTGATATTATACAAAATGCCTTCGTATC TAATTTCACTTTTTGATGTTAAACTAATTAGGCTTCCGATATACGAATCAGCCGATGATGATGATGATGATGGTTTTGAACCTCCTTCACTCGC CATATGTTGAGTGAGGTTGACTGTGAGTGAGTGTTTGAATAACTGGTTTGATAGTAAAGTTTAGGGTTTGTAATAAACTGATGAATTTGGGGAT CCGTTTTTGTTTATCTGAATTTGAAAGCTCGCCGATAA |
Primers for UN52340 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CACTAGGCATGACCTGTGGA | 59.701 | 20 | TATGGCGAGTGAAGGAGGTT | 59.694 | 20 | 215 | 72 | 286 |
2 | CTAGGCATGACCTGTGGACC | 60.533 | 20 | TATGGCGAGTGAAGGAGGTT | 59.694 | 20 | 213 | 74 | 286 |
3 | CACTAGGCATGACCTGTGGA | 59.701 | 20 | CATATGGCGAGTGAAGGAGG | 60.615 | 20 | 217 | 72 | 288 |