Simple sequence repeat (SSR)
>UN52278 TGGCTTGTGTGCTTTCATTAACAAATCTGACCTCAATAAAGCTTCTCTATCAAACGAAGGGACAGGTTGGAGCGTCATCTGAGCATACACTTCA TCTGTTTCTGTATCAGCATGCAATGTGACGCTGTGAAGGATGCACAACAACTTTGACTGAAGATTGGGATAGTTTGGAATTTGAGCATCCACAT CCTTCTTCATAGACGCGGCAACCTGTTCACTATGTCCTTGAGGAAAATAAACAACGTGCGTTCCGGCAGGCGGTAAGTTGACCAAAGGTCCAGC ACACGCTTGCCATAACTCCGGATTTATTATCCTCTGATTATTATTTTTATCTCCACCTTCATTAGGATTCGCTGTAGATCCGTTACTATTCTTC ATAGCTAGCTTAACTTAATAACTGATCGGAATATTCTATCGCTGGAGCTTCATCGGAGCTAATATAAGTTAAAAAAATCTAGTCTCAATAAATA AGGTCAAAATCTGTACGGAAAAAGCTGTTAGACGGTGAAGCTCGCCGGAAAAAGTTGTTAGGCCAAATGCTGCTGCTGCTGCCAACTTTTTATT TTTTCTCTGTCTGAAAAGTATTTGTAGGAATGAATGAATTTTTTTTAT |
Primers for UN52278 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CGGAAAAAGCTGTTAGACGG | 59.876 | 20 | TTCATTCATTCCTACAAATACTTTTCA | 59.412 | 27 | 117 | 486 | 602 |
2 | CGGAAAAAGCTGTTAGACGG | 59.876 | 20 | TCATTCATTCCTACAAATACTTTTCA | 58.277 | 26 | 116 | 486 | 601 |
3 | CCACCTTCATTAGGATTCGC | 59.528 | 20 | TTCATTCCTACAAATACTTTTCAGACA | 59.543 | 27 | 264 | 335 | 598 |