Simple sequence repeat (SSR)
>UN52051 TAACTATGTAGCATAGTGATCAACTTTGTTGCAAAACAACAATGAAAATATCAAAGACTACAGAAATGATTTGCAAGAAATACATGTTACAAAT ATGCTATGATGATACATACAACTTATGTCGAAGCAACAGTTGTGCAAGCACTTTTACGACCACGCCCTATTCCCTTCCTTGGATAATCCATAAA ATCCCTCTTGAATCCCCCCAATCCTTTCACTTCCTGCTGGCATGTTGCTGAATTTGGTTCCCTGGAACCTTGTTTGTCAACAGCAACAACATTA ACCACCGTCCCAGATTCTGTAACCGTGTCTTTCGTTAGCGTAACTTCCATCTTTGCCGGATTTTTCCATCTGCCATCTGACAACAATGAGCTCG TGTTGGAATTAAGATCAGCCACCGCCTCCATAATCGAGCACGCCTTACTAACACATTCTGGAAGAGCAAAAGATGGTTGTGTTGTGGCAGCACT GCTATGCGAGTTCTTCTGGTGAAAGTTGTGAATATCTTCAAGTAACAAACTTGCATACGATGGTGGACTAGGATCAAACCTTGTTTCTTGATTC ATGTCCAAGTCCCGTGACAGCTTTCGGATTCTCCCCATATTAGCATTTCCCGACTGCGCAGATCTAACAGAATTATTATCAATCTCAGCCAGCG ATTTCCGTCCATAATACAAACTATCAACCTCCCTCATATTCCTCTCATCCAGCTGTCTCTCCTCTCTTCCTTGATCATCATTAAAAACCCGAAG ATTTCTCTTAGCTGGGGACACATTCCGCTTAACATGAATCCTCTTAACCGCACCAACAACCATCTGTTCACCTGAATTACTACTCTTATCAGTC GCAGGAACTGACACCATCTTCACAGGCCTATTATTACAACTGTCACCACTACTACATACATTCACATTTCGGCTACGAAAGGGTGATTGAGATC TCCTACTAGGAGATATACTGATTCTCCTTTCTCTATCTCTGCTATTCGACCTTCTTCGGCCCAAATCTCTCTCCCTACTAGTTCCCCTTGAAGA AGATGGAGACAAACCCTTAACTTCATTACAACCAAAATCCTCTTTATCATCAAAATCAGCATTTTTTAACCTAGTGTTCAAGTCGAAATCAAAG CTTCTTTTCGACCGAGTACATCTTCTTTTTCTGGGTTTTTGAGCTCCTGTAGAATTACTCCTATTAAGCCTACCACATTGTAACAAAATCTCAT CTAAATCTTCCTTGGTACTAGAACATTGGTTTGAGTGTTTGTCTGTTTCATGGCTTATTCTGTGTTTGATGACAAAGACTTCTTTTTTGCTGAT AATATTTTTGGGTTGTTGTTGTTGTTGGTCTGATTTTAGGTTAAATTGTTGAGGCACAACGATTTGTGGGGTTTTAGTGGCGGTGCTTTTCTTG CTGAAACAAGTGCCCATAGATAGGTGTTGATGAGAGAGAA |
Primers for UN52051 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCTGGGTTTTTGAGCTCCTG | 60.366 | 20 | AGAAAAGCACCGCCACTAAA | 59.883 | 20 | 251 | 1158 | 1408 |
2 | TCTGGGTTTTTGAGCTCCTG | 60.366 | 20 | AAGAAAAGCACCGCCACTAA | 59.883 | 20 | 252 | 1158 | 1409 |
3 | TCTGGGTTTTTGAGCTCCTG | 60.366 | 20 | GAAAAGCACCGCCACTAAAA | 60.244 | 20 | 250 | 1158 | 1407 |