Simple sequence repeat (SSR)
>UN51927 GTTGAATACATATGAATTGTTACATTATGGAAAGCGGTTTAATATGTACATCTCCATTGTTCCAGACTCCCTGCAGGCCTGCACTCATTCACAC GCTTACACACGTGTACGCGCACACACACACCCACACACACACATACAAAAGCATAAACATATGAAACAAGATCAAGTTCCACAACTCACTGCTG TGACTAAAGCGCCTTCTATCATGAGCCGTGACCATCATCAAGGTCTGTTCCTATAATGTGACTTGTTTCTTCATGCATGCTTGTGAATCTTTAG GTGTCAAATAAATCTCATGAGCAGTGTATGTTCGAAATCCATTCTCCATTGATGCCAAATTTATCCCTCTGTTTTCACCCGTAAAAGCTTGGTG GCATGGAGAGCTCTTTGGTAGCTCCAAAACTTTTACTATGCATTTCTTCTCCATGTTTGGAACTGCATGAAGATGGGAAGGAAGATCAATGAAA AAGTCCCCATATTCATCGGTTCTGCCTCTTACCCAATCTGATTTACTCATCTTCCTGTTTGTATCACATGAAACTGCTACTGATGCTCCGGGGA TAGGATGTGATTGACGAACAGAAGTTCCATCCAAACAAACATCACATAAAACAGAACCACTGATGACCACGTTAGAGAGCTTCTCATCACCGTA TCCAGCTTCCCTTCTCAACTCATCATGTGTAAACAGTTCCTCCATGACATCATGTCTAGCTGCAGTTGCCGGAGCCCCGAGAAAAACCAAGAAT ATGAATAACAAGATTGTCATGATATTGGTGTGTCCTTGAAAAATGGTCATTATCATTTGCG |
Primers for UN51927 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTGCACTCATTCACACGCTT | 60.056 | 20 | GAAGGCGCTTTAGTCACAGC | 60.162 | 20 | 126 | 79 | 204 |
2 | CTGCACTCATTCACACGCTT | 60.056 | 20 | TGGTCACGGCTCATGATAGA | 60.225 | 20 | 144 | 79 | 222 |
3 | CTGCACTCATTCACACGCTT | 60.056 | 20 | GGCATCAATGGAGAATGGAT | 59.715 | 20 | 260 | 79 | 338 |