Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN51927
GTTGAATACATATGAATTGTTACATTATGGAAAGCGGTTTAATATGTACATCTCCATTGTTCCAGACTCCCTGCAGGCCTGCACTCATTCACAC
GCTTACACACGTGTACGCGCACACACACACCCACACACACACATACAAAAGCATAAACATATGAAACAAGATCAAGTTCCACAACTCACTGCTG
TGACTAAAGCGCCTTCTATCATGAGCCGTGACCATCATCAAGGTCTGTTCCTATAATGTGACTTGTTTCTTCATGCATGCTTGTGAATCTTTAG
GTGTCAAATAAATCTCATGAGCAGTGTATGTTCGAAATCCATTCTCCATTGATGCCAAATTTATCCCTCTGTTTTCACCCGTAAAAGCTTGGTG
GCATGGAGAGCTCTTTGGTAGCTCCAAAACTTTTACTATGCATTTCTTCTCCATGTTTGGAACTGCATGAAGATGGGAAGGAAGATCAATGAAA
AAGTCCCCATATTCATCGGTTCTGCCTCTTACCCAATCTGATTTACTCATCTTCCTGTTTGTATCACATGAAACTGCTACTGATGCTCCGGGGA
TAGGATGTGATTGACGAACAGAAGTTCCATCCAAACAAACATCACATAAAACAGAACCACTGATGACCACGTTAGAGAGCTTCTCATCACCGTA
TCCAGCTTCCCTTCTCAACTCATCATGTGTAAACAGTTCCTCCATGACATCATGTCTAGCTGCAGTTGCCGGAGCCCCGAGAAAAACCAAGAAT
ATGAATAACAAGATTGTCATGATATTGGTGTGTCCTTGAAAAATGGTCATTATCATTTGCG

Primers for UN51927 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1CTGCACTCATTCACACGCTT 60.05620GAAGGCGCTTTAGTCACAGC 60.16220126 79204
2CTGCACTCATTCACACGCTT 60.05620TGGTCACGGCTCATGATAGA 60.22520144 79222
3CTGCACTCATTCACACGCTT 60.05620GGCATCAATGGAGAATGGAT 59.71520260 79338