Simple sequence repeat (SSR)
>UN51426 TTTTAGTAAAAACAAGAACAGAGAGAGACTATTAATAACAATAATAAACGTTACAATCCGTCATACAGCAATCTATAAATGTATTTATTTTCGC AAAGGAAAATAAAACAGCTTCAAAAGAGGCCTAAGCCAACAAGATACAATTCAGCAGAGAGGGACCCTTAGCACATTCATCGTTGTTAAACTTT TATGAGATGATGCATTTCTAAACTTCCAAATACCAACCGTTTTGTACACTCTTCAGGAAGTTGATAATCAGGGATAATAAGATGCGGACGAGAA GAAGATAGAGCCGCCTCCTCTTTTGGGTCTTCTTGTGAATGCTTATCTAGGTCGTCTTGTGAATGATGATTCTTCCTCGTCCTCCTCCTCGTCC TGTTCTTCTTCTTCTTATTCTTCTTCTGACTCGTCTCCTTTTTCATCTCCTCTTCCGCTAAAGGTACCACTTGAGCTTCTAATCGGCTAAGGAT CTTAGAGCTCACTAGGATGTCAAGAACAGAAGAAGAAGAAGAATGGCGTGGCACATGAGCAAAGTGACCTTTGTGATCCTTACTATTCGCAGCA GAAGCAACAAATGATCTAAGGCATATTGTCTTGAGTGCGTCGAATTCTTGGTCCTCGTGAGCGAGGCTGACAACATCAAGAGCTACATTCATTT CCTTTAAATTTTTTCCAATCTTTAGAACGTACTCCGTCAAGTATCCATGACAAGGCCCTGCAACAAACACAAGCATCCTTTTCTTCGTGCCTAT GGGAATTCGTATAAAGCCAGCCTTAGAATAGCGGAGGCCCTGAAGTATGTCATACGCATCGCCCCAAAGAATGTTTTCTAGTGTGTGAGTCAGA AAATGTTCAACATCGTTGGTAGGTGGAGCTGGCCAGAGAGTTGCACCCCAGCCAAGTGTGGCTACGCCCACACGAAACTTGGGATTAGACTTGA TTTTAGCGCGGCAATAGAGTCTGATAGCCTCTAATTGAATCTTAAACAGATGACTATCCTTTGGAACATAACTGGAATTGTCAACAACGATCAC TGTAGCCTCCTCCTCGGTTTCCATGGTTGAAAATCACAAGTCCCTGCAATTGAAATTGATCGATGTAACTTTTTTTGGTTTGTGAGTTTTTTTC TTC |
Primers for UN51426 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTCTTCCTCGTCCTCCTCCT | 60.328 | 20 | CAAGAATTCGACGCACTCAA | 59.988 | 20 | 263 | 352 | 614 |
2 | ATTCTTCCTCGTCCTCCTCC | 59.636 | 20 | CAAGAATTCGACGCACTCAA | 59.988 | 20 | 264 | 351 | 614 |
3 | TTCTTCCTCGTCCTCCTCCT | 60.328 | 20 | TCATTTGTTGCTTCTGCTGC | 60.142 | 20 | 227 | 352 | 578 |