Simple sequence repeat (SSR)
>UN51361 GAAAGAAAGGCATGTTAAAATTTGGATTATAATCGTTACTATCTAACAAAATTGGGAACAAGAATAGGATTTACATCCATCCATGTTGTCCAAG TATAACTTGATATAAGTTTTGGTTAAATTGCGAAGATCCCGGTGGACATCGTCTGGCCATGACCATGACCACTAGAGCGAGAAACGGGTACTTG TTGAGGAGAGTTCCTAGTACTACTACTACTACGGCAATCATGTTTATTTCTCATCATCATCTTCTTCTTCATACTTTCTTCTTCCATTTTTGCA ATCTCCATAGATCTACACTCTATACTACAAAATGCTTTCTCTCCCCTGTACATGTATATGTCTTTCCCATGTAGTTGTTTATTGCACTCATGAC AAGTACTCAGAAAGTGAGCACCTGCTTTTATATCATCAACTCTTGCCGGTGTAGGAGATATGTCGAAAAGGGACCTTTGCTTCTCATCACCACA ATTATGATCATATACTAGTTGTTTTCTTGAATATGGATTAATATTAGCATTAATATGATGGGATGGACGGAGGAGGATTGCTGTCGGGTCACGG GATTTGTCCATGTTAACTATAATACCAAGTCCAATCCCACGACCCGACACCACTTCATCACATGATGAATTATGGACTCTTCTAGGTGACATAA CTAGTTTCAAATCTAAAGGACTTGTAGGGCTGCTGCAACTACTACTACTACTACTTCCCTCAAACCACCCCGCACCGCTAGTTAGCAACTTTTC GATCACCGCTCCTCTCATCGCCATCGCTAGCTAGGTAAATATATCA |
Primers for UN51361 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAGCGAGAAACGGGTACTTG | 59.875 | 20 | TCTCCTACACCGGCAAGAGT | 59.867 | 20 | 266 | 169 | 434 |
2 | GAGCGAGAAACGGGTACTTG | 59.875 | 20 | TACACCGGCAAGAGTTGATG | 59.716 | 20 | 261 | 169 | 429 |
3 | TGACCATGACCACTAGAGCG | 59.855 | 20 | TACACCGGCAAGAGTTGATG | 59.716 | 20 | 276 | 154 | 429 |