Simple sequence repeat (SSR)
>UN51299 TTTTTTTGTTCCAAAACCAATAAGGCCGATAAATGTATAGACCCAAATAAGCAAGTACACATGAGTTGCATCCTCGGCGATAATTTGTATTACA AGATTATTATGAAAAAACAGTTTACCATTCAAGTGAACTTACCTTCTCTCTGCTCGTTTCAATAATGGTTGCATCACACTCTTTTGGGTTTTAA TACATCTATATCATAGAGCAAAATTATGTTCCAGCCTTTCTACGGCCAACACGAGCCACGAAACCAGCCTTGATTTGAGCAACAGATCGCCCAG AACCACACTTCTCGCATCTGAGGAAGAAAAGACGGTTTTCCTTGGAAAGAATTGTATCAGGACTCTTGCAACCGTTGCAGATAACATATTCATT GACATATCGCCGCAAAATCCCTTCAAAATTTTTGGGTGCAAATCTTCCCTTGACTACCAATCTTTGCTGCCCATCAAGTGATCCACTTGTACCA AGCTCAGCAAGCAAAAAGGTCATCACATGCTCTGGCTGCCTATGCATCGATTTGCAAAGATCCATGAAGTTCACAAAGACAGTTTTCTTTGTTC CTTCACGAAGAACTTGTGGTGGCCTCATAACTGTTCTCCTTCTGTCTCCAGCAAGCTCAGGATTATTCTCACGGAGAATATGAAAGACTCGGCC AAGAAGCTCCTCATATAAGTAATCACGATCCGTTCCTTCCCATGGAAGTCCTTGTGGTTGTTCCAAGTCGATTCCTTCTGCTGCCTCATCCTCT TCAATAGGATTATCTAAATCTTCATCAGCATTTTCTTTCTCCTCATCCAAAAGATCTGTCTGCACCTGTTTCTTCTTCTTCTTTTTCAGACCAG TAAAAGTCGGCTCAGAACTTTCTGACACAGATAAGCTCTCAGTTTTCTCAGTCAGCTGTTCAACAGCATCATCAGCAGGGTCTTGAATGACGAC CTTCTTCTTCTTCTTCTTTTTCGTTGGGTCAAATGGTGCAAGATCTGCTGCACCTTCCTCCTTCAACTCAATCTGATTATTATCTTCTTCAGCC ATAACTTTGGGATTGAAAAATTAGTTTGTGAGATTTTAGAGATTGATTGTTTGTTTGTGTAAACCT |
Primers for UN51299 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTCTGCTGCCTCATCCTCTT | 60.096 | 20 | GATCTTGCACCATTTGACCC | 60.326 | 20 | 252 | 734 | 985 |
2 | CTTCTGCTGCCTCATCCTCT | 59.703 | 20 | GATCTTGCACCATTTGACCC | 60.326 | 20 | 253 | 733 | 985 |
3 | TCCAAGTCGATTCCTTCTGC | 60.34 | 20 | GATCTTGCACCATTTGACCC | 60.326 | 20 | 266 | 720 | 985 |