Simple sequence repeat (SSR)
>UN51258 GTGAAATTATTTAATGGACAGAAAGAATTAAATATAGAGATTTCTACAACTTGTGTTTTTAACTACATTGTTTATCAAACAAACAATCAGTAAC ATATCTATCTATAAGTGTCCAATAGTACATACGAGCAACAAAACGTAATATGTAGCACAGTTTTCTCCATCAACAGAAGACAAAAAAAAATGCA GGAGATAAAAACTCCCAAGCTGCTTAATTGTGCTGTTGCATTTCCTCTTCTGTTTTCCAAACAACGTCGTTGAGGCTATTAGAAAGTCTTTTAT AGAACTTATGAAATTCCAAAGTATCTCCTTTTGCTTTCCGTACTTCAACCATGTGAAGTGATGGTGCTACTTGAAATACCTCGGTAGCAATATT GAGGTTTCCTTTTCTCCCAGCTTTGATATTCTCTAGCCGTAACTTATAGTTTTTCTTGTGCACATCAAATCCAAGTGGTTTTGCGGCTTCTTCG ATTTTACTAACTATCTCATTTGCTGGACATCTTGATGTGAATCTAGTCTCCCTTTTGAATCCCTGTTCAATCTCGAAAAGATTCCCGAGGTTGA GACCCTTAGACATTGAAATCAGCTCAAAAGCATTCATGGCTGTTGGATGTTCTTCTTTCTTTTCTGTAACATGATGCTCTTCTGAATCTTGAAA AGCTGCTTCTACATCATCGAAATTTGCCTCTTCTTTCTCGATGAATTCAGGTTGTTTAAAACCCTTTTTAAACCACTCATCATTCAATAGTTCA GATATAGTGATTCGAGTCATGGGGTTTGGGTCCAATATGCGAGTTATCAACTTAATGGCAGTAAATGAGACCCACGGAGGACAAGTGAACTCGG CAGCTGAAATTTTTTTATAAAGGTTCATAAGATTAGAATCATCAAATGGCAAGTAACCTGCAAGCAGTACAAAGAGTATGACTCCACACGACCA TAAATCTGCAGTTGCTCCATCGTAGCCTCTATCTTCTAGGACCTCAGGAGCGACATAATTCGGAGTTCCACAGGTTGTGTGTAGCAAACCGTCA CCCCTAACTTGGCGAGAAATGGCACTTAATCCAAAATCCGAAACTTTAAGGTTTCCAGAAGCATCTAGGAGCAAATTTTCTGGCTTTAGATCTC TGTGATAGACACCCCTACTATGGCAATAGTCAACAGCATTGATAAGCTGTTGAAAATATTTTCTGGCTTCATCTTCTTGCATTCGTCCATGGTT CACAATTTTATCAAAAAGCTCTCCTCCTGTGACAAACTCTAGCACAATAAAAATCTTGGTTTTGCTTCCCATAACCTCATATAAGCGGACGACA TTCGGATGCTTTATCAACTTCATAGTTGCTATTTCCATTTTTATCTGTTCAGCCATTTTATGTTTAACAACTTTTTCTTTGTCAAGGATCTTGA GAGCAACAGGTTCACCAGTTTCAGAATTTCTAGCAAACTTCACTTTGGCAAAAGTTCCCTCACCAATCGTCCTTCCCACCTCATATTTACCCAC TCGTCTCTTGATTTTCGGAGGATTCATTCTTGATTATCTGATAATAATAATAATAATACTAGGACATACAATTAAGAAGACAATCACTTAAAAA AACATGTCATAAACCGTTGAAACTGAAACTAACATCAAAAGTCGAGTCCGTTAAACCTTTAACACAATTCATGAAGAAGAAAAGAAATTCAATA GATACTAGGGGCATGTGGTGTTTAACTATATCACATGTTTTTTCACATGTACTAATCTCACATGGAACTTAAATATAAATAAGGGGTTAGCTTA TTGTGTTGTCATGCTTCAAATACAGTAAGTGTTTAGGTAATTGCATCTCAAGAGCTTATATTAGCTTATTTGTGAGTGAGAGAAAAAAGGCAAT AGGAAATTTGCAGCTTAAGCATGGCCACAAGTCCACAACATATACAATTAAGCTATTTCACCGGTCCATATAGTAAAAGCACCAACCAAGATAA GATTACTCTGTTTTGCAAATACAAAAAACAGTGAAACTAAGTAGATATGCAACAACTAAAAAGC |
Primers for UN51258 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTGGCAAAAGTTCCCTCAC | 60.088 | 20 | GTTAAACACCACATGCCCCT | 59.717 | 20 | 265 | 1454 | 1718 |
2 | TTTGGCAAAAGTTCCCTCAC | 60.088 | 20 | AGTTAAACACCACATGCCCC | 59.717 | 20 | 266 | 1454 | 1719 |
3 | CGTCTCTTGATTTTCGGAGG | 59.807 | 20 | AGTTAAACACCACATGCCCC | 59.717 | 20 | 214 | 1506 | 1719 |