Simple sequence repeat (SSR)
>UN51143 TCCCTCCTATTCCTCCTACGATACTCCATCCAAACAAGCACCACATGCAAAGCACACTGCAAGCCATACCCAACAACCCAAACCCTAACAGGAA CATTAGGCTTCTCATTCCAAGTAACAAACAACATGACAACACTGACAACCACAAAAGCCATATTCCACGTCATATCCAACGCCACAACCGGCTT GGAGTATCCCCAGTCGGCGCGCCGCTCTTCCAGCTGACGCGCTGCTGTTTCTCGTACCAACATAGATGCGCCGTGACGTGTCCGACCAGATGCA CGGCCTAGTAATAAGGAGAGTGACGTGGGTCGGTTGTTGTTGTTGTTGTGTGGTGTGAGTAACGGTGAGGTGGTGGTGGTTGTCGACATCTCGT CCGATGAGGACATCTTGAATGTTCTTTTTTTTGTTTCTGTTGTTGGTTTTTTTTTGT |
Primers for UN51143 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCCAAACCCTAACAGGAACA | 59.824 | 20 | CCACCTCACCGTTACTCACA | 59.591 | 20 | 279 | 77 | 355 |
2 | CACAACCGGCTTGGAGTATC | 60.517 | 20 | GTCCTCATCGGACGAGATGT | 60.08 | 20 | 211 | 177 | 387 |
3 | ACCAGATGCACGGCCTAGTA | 60.678 | 20 | GTCCTCATCGGACGAGATGT | 60.08 | 20 | 115 | 273 | 387 |