Simple sequence repeat (SSR)
>UN51006 TAATGGATGAATCAATTATATGAAATTTAGATAAAGAGTTAACTAGGCATACCTGTATGTAAAAACACAGATATTGAAAACATAGAAGATTGAA AAACATGAAATTCCAACAGCTAAAGAGTAGATACTCGCAACAAGCAGCATTTTTAATTGAAAAGCAAACTATTACAAAGCATAAACAGGTCTTG AGCAAGAGAAGTTTGTTACTCGTCGGCCTTGGGTGCTTCTTTAATCTCCTCTGTGCTGTCATCCTGCATGTCCGAGGTCCACAAGGTGAGGTTA TCACGAAGAAGCTGCATTATCAGGGTGCTGTCCTTGTAGGAATCCTCTCCTAAGGTATCCAATTCTGCAATAGCTTCATCAAAAGCCTGCTTTG CAAGATTGCATGCACGGTCAGGTGAATTCAGAATCTCATAGTAGAACACAGAGAAATTGAGTGCCAATCCAAGTCGGATGGGATGAGTAGGAGC CAGCTCTGCATTAGCAATATCCTGAGCAGCTTTATAAGCAGAGAGAGTATTTTCAGCAGCTTGTTTCCTTTCAGATCCAGTTTTAAACTCAGCC AAATACCTATAATAATCACCTTTCATCTTCAAATAAAACACTTTCGAATCACCGTTACTCGCAGATCCAATCAGTTTCTCATCTAGCAGTTTCA ATATTCCATCACATATCTCTGACAGTTCCTTCTCAATCTTAGATCTGTATTCACGGATGGTCGCCACGTGTCCTTCGTTACCTCTGCTTTCCTC TTTTTGTTCGATTGAGGAGATTATGCGCCACGACGCGCGACGCGCCCCGATTACGTTTTTGTACGCGACGGATAGGAGGTTTCGTTCTTCGATT GTGAGTTCGGTTGTGGTGGTTATGAGGTTGGACATGAAGGTCACCATTTCTTCGTAACGTTCGGCTTGTTCGGCGAGTTTCGCCATGTAGACGT TTTCTTCACGCGCTGCCATTGAGAGTGGGGGTGGGTTTTTCTGTTTTGTGTTTTGTGTGTGTGTGTGAGGTGGTGGAGAGGAAAGTGGGGTTTG AATGGGGTGTTTGGGTTT |
Primers for UN51006 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTCTTCGTAACGTTCGGCTT | 59.883 | 20 | AACCCCACTTTCCTCTCCAC | 60.349 | 20 | 139 | 894 | 1032 |
2 | TTTCTTCGTAACGTTCGGCT | 59.883 | 20 | AACCCCACTTTCCTCTCCAC | 60.349 | 20 | 140 | 893 | 1032 |
3 | CGATTGTGAGTTCGGTTGTG | 60.152 | 20 | AACCCCACTTTCCTCTCCAC | 60.349 | 20 | 191 | 842 | 1032 |