Simple sequence repeat (SSR)
| >UN50977 TCCCTAACCAAATCTTCTTCTCAATATTAACTTTAATAATCCCTTTTGACCTCAGTTCTCTCAGCCTTCAGTTTTGACAACATACTCATTTAAT CCATAATGATCCCTTTGACCTCTTTATTCCTTGATATTAAATCCCGCTTTTGCACTAGTTTCTACAAACATGACTCCGTGTTCACGAGCTTTTG CATCCCCTTCTTCAATTGATACTTGCCTTTTGTCAACAAGATCAGTTTTGTTTCCAACAAGGACTATAATCACATCGCTGCCTCGCTCGGTGCG TACTTCTTCTATCCACTTTGAAGTGTTCAAAAATGACTGTCGATTGGCAACATCATAGACAATCACCGCAACTGATGAATCTCTTATATAACTT GGAATAAGACTTCTAAATCTCTCTTGCCCAGCAGTGTCCCAAAGCTGTAACCGAACTGTTCTATCTTCAAGGTACATTGTTTTAGACAAGAAAT CGATGCCAATAGTAGCCTGATAAGTGGTATCGAATTTGTCATACATGAATCTGGTAATGATACTGGTTTTACCAACTGATTGATCCCCCAAAAA TACCAACTTATATTTCGCTAGAGGTGACACTACCGCCATTTTTATTACTATCAGATCAGATCAGATTCAGATCTCTAAATCTCTAAATGCGTGT GTGTGTGTGTGAAAAAAATAACTGAATTTGATTGAAACTCGGAGGAGAGAGAAATTAATTAATTAGGGTTTGTCTTGTTTAGTTGTTTAGTTTA GTGGGTTTT |
Primers for UN50977 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GAGGTGACACTACCGCCATT | 59.997 | 20 | TCTCCTCCGAGTTTCAATCAA | 59.799 | 21 | 122 | 585 | 706 |
| 2 | TGATCCCCCAAAAATACCAA | 59.988 | 20 | TCTCCTCCGAGTTTCAATCAA | 59.799 | 21 | 156 | 551 | 706 |
| 3 | TTGATCCCCCAAAAATACCA | 59.988 | 20 | TCTCCTCCGAGTTTCAATCAA | 59.799 | 21 | 157 | 550 | 706 |