Simple sequence repeat (SSR)
| >UN50924 GGGACATACGAAATGACTATTGTTTCACTTTTTACACTTTTATCCTACAGACTCTACCTACTAGGGGCAGAGTACAGAAATCACAGTAGCCTGT ATTCTTTTTCTAATCCCCAGGGGGTTGTCATATTTGTGCCTATGCTTCTGTTGTTGATGATAGAGCTCTGATATCGAATTCATTGAGAAGCGAA GGTACAACTTTCACAGGTACAATGGAGAACCCACTCTTCTTACAAGCATCTTCTAATAGTGCAACTTGTGACGGTCCATCAGGGCAATAGGCAA CCACCGCTCCTCCACTGCCTGTAAACTTTGATGCTGCACCAACACTTCTAGCCACTTCCACCATCTCTATGTTTAGAGCCCCAAGAGCTGCATC ACCAAACATCTGCCGTCGTAAATCGAAGTTTTTATTCATAAGGTCTGCAAGTTTAGCATAGTCCTTTTCAAGTATTGCTGTTTTTCCTTCAAGA GCTAAGTTGGCGACTTGTTCCATTGATGATATTATGAACTCGTCTCCGTCTAACCATCTTTGTCGAACTGAACTATGTACCTTCCCAGAATCAC TTGGATTTTCAGCATAAATGAGATGAAGAGGAGGAAGAAGACTTGAATTTAACTGTGTGTATTTACCATGACCATGTTTATGCATGTGCTCCTT GTCAAAATCCATGTACACAAGTCCCCCATAAACTTGAGCTACTCTGTCCTGTAGACCAGCAACAATTCCAAGTTCCTTTTCCGCATTCAGGATA AGTTGCGGCCTTATCTCCACAGCTATCTTATCTCGGACATTGTAAAAGTCAAGAAGGCAGTTAAAAGCAGCACATGCAATGGCACTAGAACCCG ATAGCCCGGTCTGACGAGGGATGTTGGTTTCATAAGAAAGGGAAAAGTTCTTGTCATGAAGAAGAATCCCCTGTTCTTTACAGTATTTGGTAAA AACTTTACACATTGCCATGAGCAATCGCACGCCTCCATAGTAACCTTCGTTTTCCAACCGATTCACCAGATGATTAAGTGAAGAGAATTTAACA AGATCATGAGTATGGTGAGGAACAATAAACAGATCTGAAGAAGGTTCTAGACGAACACTAGCATTGAAATTCTCGATGTTTACTGAAATTGTAC GCCCGTAGTAAACATCGCTCGGGTTACCGATTAGTCCGATCCGAGCGTAAGCTTTGTGCTCGATCATTGGACCTGATGCTGATGATGATGATGA TCCGTTTTCTTTCATCTTGTTCTTGTTTGTTAGAATGCGTGTGTAATGTGAAATTGTTAAACGTGTCAGTGAA |
Primers for UN50924 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GCCCGTAGTAAACATCGCTC | 59.736 | 20 | CAATTTCACATTACACACGCA | 58.117 | 21 | 150 | 1129 | 1278 |
| 2 | CTTTGTGCTCGATCATTGGA | 59.799 | 20 | ACAATTTCACATTACACACGCA | 59.017 | 22 | 100 | 1180 | 1279 |
| 3 | GCCCGTAGTAAACATCGCTC | 59.736 | 20 | ACAATTTCACATTACACACGCA | 59.017 | 22 | 151 | 1129 | 1279 |