Simple sequence repeat (SSR)
| >UN50846 GCTGATTGCTTATATTATTTAATGTAAAGTGGTTGCTTTATACACGGCTATAAGCTCAACTCCACATTTGATTTGATAAAAGTAACACGAAAGT TCTACATATCCAGCGGATGTAGAATCATTTGAGTAGCAATTACAAAGTATTATATAAACACATTATCATCGAGATGATGCCAACCAATACACAA GAACTAATAGTCTAATTTCAACATTATGATCGACTTACAAGATCATCATAAGGACCACAAAAAACCCAATCATCAGAAGTAATGTCTTCAGAAG GTTATGCTCTTGATTTCCTCGTCTTGAATGGAAAATATCATGAACATGATGATGTCCCCCGTGAAATCCACTTGGGAATCTAGGTCCAAAAGCA TGTCGTGGACCATAATGTAACGGATTTTGGACTCCATGAACATGCATATCAAGTAAAGATGGGAATAAGCCTCCAAAACCAGCAGACACTGCAA AGTTACCAAACCGTGCGGACGCTGTGGGCATAAATCCTCCAAACCCAAAATTCGGAAAGTTGTTATTGTCAGGAGCAGGGGCAGTTGCAGGACG TTGCCCAGCTGGCCTATGTGGGATTTCAAGGCCGGGCACCGGTTTTGACCGTGGGTCAGTTTGTGTTTTCCCCCTGCCATATAGAGGAATTAAT TTCTCCTCTTCTATAAGGGCTTTACAAACAGGACATTCTTGGGAACGTGAATGAATGTGGAGCCATTTGTAGAGGCATGGCCAACAGAAGAGAT GACCACAAAGTGTTACGATAGGGTCTTCAGCTAGTTCAAAGCAGATATTGCATTCAAAATCCCCTGCATCGTTGCTACCAGTGTCCCTTGATGA AGAACTTTCTGGAGGCTTTATTGTTGATTCACCGATATTGCTTGACATTTCAAAAACTGTGTGCAAACATTGGCCAAGTATACCTGAGGGTGAA GATGAGTGGATCCAAAGTTAGGGTTTGTGATTGATTGATTCTTAAGAGAGAGAGAGAAAGAAAAATGAGATACTAGTCAACAGATTGGTAATAG AGTCGGGTAATTGGGCGGATGATTCTGGGAAGGATCGAGTGTTTTACTTGGTAGGTAAGTCTAGCATCCCTACCGACCCGATTTCTTTCTTTCT ATACGGGCTTTTGGTTA |
Primers for UN50846 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGGCCAAGTATACCTGAGGG | 59.948 | 20 | AAGAAAGAAATCGGGTCGGT | 59.94 | 20 | 209 | 917 | 1125 |
| 2 | ATCGTTGCTACCAGTGTCCC | 59.997 | 20 | CTCGATCCTTCCCAGAATCA | 60.15 | 20 | 254 | 820 | 1073 |
| 3 | TGGCCAAGTATACCTGAGGG | 59.948 | 20 | CTCGATCCTTCCCAGAATCA | 60.15 | 20 | 157 | 917 | 1073 |