Simple sequence repeat (SSR)
>UN50810 CCTGTATTTTGGCTCGTACTTCTTCGCGTTCTCAACGGAATCATAAATCAAGCCAAAACCAGTTGATTTACCACCACCAAAATGGGTCCTGAAT TTGAACACAAAGATGGCACTCTCATCTTTCACTCCATAGATCTCAGCCAAATTCTTCTTCAAATCAGCCTTGGAGACATTTGCCTTGCCTGGAT GTAGCACGTCAATGACAAATTGCTTCCTTGACAGAAGCCGGTTTGTCATGAACTTTCTCGTACGAATCGTCACTTTAGCGTCGGCCATTTTCGC TGAGATGAGCAAGTACTCTGGTAAAGGACGGCTGCTGCTGCTGCTTCTGCTGCTTCGTTCGGCAAATGAAG |
Primers for UN50810 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCCGGTTTGTCATGAACTTT | 59.978 | 20 | ATTTGCCGAACGAAGCAG | 59.948 | 18 | 125 | 225 | 349 |
2 | GCACGTCAATGACAAATTGC | 60.127 | 20 | ATTTGCCGAACGAAGCAG | 59.948 | 18 | 158 | 192 | 349 |
3 | CACCAAAATGGGTCCTGAAT | 59.647 | 20 | ATTTGCCGAACGAAGCAG | 59.948 | 18 | 275 | 75 | 349 |