Simple sequence repeat (SSR)
>UN50753 GAGCCTTGAAAGATTATGATAAGCATATAAACGATGAAACGGGTCCATGACTGTGTCATTATACACGTTGTAATGATAAATCTTTCCTGTGACA GAAAAACGAGCATGGAATTCGGGCAATGCAGGGCTAATTTCTTTAACACGAATGTCGGGAGGAAGAAGACCGTTTAGTGCTGCGTGCATATCTT CCAATCTGTCGAAGTCATAATTGAAAGGTGTAAGAAAGTGTGCCACCTGACCTAAGGCGTGAACTCCTGTATCGGTCCTACTCGCTCCAACTAA ACACAGATCGTTACGTTCTAGTTTTGTAGCTCGAGTTAAGGCTTGTTCCAAGCTCGACTGTAAAGTTGGTGTTATGGGCTGATACTGCCAACCT TGAAATCGAGTGCCATCATAAGATAAAAGCAAACGCCATTTGTAAGCGGTTTGTTTATGTTGATGATGAAAGTTATTATTCTGGTGGTCATCTA CATGAGCAGCAGCCAAGGGAAGTCCAAGTGTCGCGTAGTCAGCCATTCATTCATTCATTCATTTCACAGCCTTCGCTTACCAAAGGTGCTGCTG AC |
Primers for UN50753 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCCATTTGTAAGCGGTTTGT | 60.003 | 20 | TCAGCAGCACCTTTGGTAAG | 59.072 | 20 | 155 | 411 | 565 |
2 | GCCATTTGTAAGCGGTTTGT | 60.003 | 20 | CAGCAGCACCTTTGGTAAGC | 60.964 | 20 | 154 | 411 | 564 |
3 | GCCATTTGTAAGCGGTTTGT | 60.003 | 20 | CAGCACCTTTGGTAAGCGA | 59.996 | 19 | 151 | 411 | 561 |