Simple sequence repeat (SSR)
| >UN50496 TTTTCAAACAAACAAAGAACTTCATAACTCAAACCATGTAGATATTCATATCTATACATATATTTTTTTCTATCTTAAAGCAACCCAAAAAACT AGCTAGACCATGTCGTAATGCTCCTAACGCACCTAACCAAAAGCCAAGGGATCAACCTATGGAACTACATCATTTCTACTTACATCAACACTAA ATAGTATACCTTAAACTATAGCCTCATTAACAAGGATGAAAAGCCTTCCATTCCTTTGATTCCACGGATTTTACCACTCTGTAGTCTCTTACTT CATAATATTAGCATTGTAGTCCTTCAAACCCTATACGAATCAGCCGACATCCCAACCAAGTACAACCCCGGAAAAACATTATCAAGATGTTTCT GAGCAATCTTATTCCGCTTCTTGGGCCTCCTAGCCGGCTTCGCCCCCGTAAACATCAAAATATCATGCTCAATCTCGTCTTTCGACAACGATAT CCACAGCCTCCTTTTCATCATCCTCTCCCGATCCTCTTCCTCCGCCACCCCCACCTGATCAGCAGCAACCACCTCCACCGTCCTCAACAACCTC CCTGACCTCACTCCACCACCGTCACCATCACCATTACCGTTACCGTTAACTTCACCGTTACCGTTACCTTTTCCGTTAGTTACACTTTTTCTCG GCCTCAGCTTCCACGGCTTCAGCTCCACCTCAACCGCAGCTGCCACGTCAACATCAACCAACTTATCAGTGACGTCATCATCATCATCGGAGTT TGTCGACTTTCTAGTCTCCTTACGAACGATGACGTCAGCATCTGGTTTCTTGTGGTGGGATTTTTTGTGTTTGGTGGTGGTGACGTCATCACGG GGGTTGTGTTTTGGGTGGTGGTGGTGGTGACGTGTTTTGCGTGTGGTGGTGACGTCAGCGTCTGGGGTGGTTGAAGTTGGGAAACGGTTACGGC GG |
Primers for UN50496 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CGTCATCATCATCATCGGAG | 60.031 | 20 | CGTTTCCCAACTTCAACCAC | 60.388 | 20 | 202 | 731 | 932 |
| 2 | CGTCATCATCATCATCGGAG | 60.031 | 20 | CAACTTCAACCACCCCAGAC | 60.399 | 20 | 195 | 731 | 925 |
| 3 | ACGTCATCATCATCATCGGA | 59.882 | 20 | CGTTTCCCAACTTCAACCAC | 60.388 | 20 | 203 | 730 | 932 |