Simple sequence repeat (SSR)
| >UN49817 TATGAACATAAAGAATCTATATTTAATCGATATCAATATGTCAAGAGGAAAATATACAGAGCTAATACCCAGAACACTGTAAGAGGGCTAGTGC TTGCTAACTGCTAGTATAATGAAATCAATAAAATGTTTAAACGAATACATGAAGAGAGTAACATGTGTGACAGGCTGGTGTTACATTTGACAAC TTACATGAAGCACGATTACTACTGGATGGGTGGCTGTTCCAACCATTTTGCACGAAATCCAGTACCTTTACAATCGCTACAGCAAGTTGCTCCC TTTCCAGCACAAATGACGCAGCTGGAATTTCTTGAAGGTACTTCACATAGCATGTTATCACCAAGAATGAAAAACCCTGTGCCACCACACCATT TGCACTCGACGTGCCCACTGGATTCACAAGAAGAACAAGCAACAGGCCTTGGTTGCTGAGAGATTAACCAAGCTTGTTCCATACGTTTAAGGAA ACCATTATTATTATTATTTGAAGATGAAGATTCCACCATTGAAGCTTTTACAACAACAACACAGTTAACCGTTT |
Primers for UN49817 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATGACGCAGCTGGAATTTCT | 59.843 | 20 | GCTTCAATGGTGGAATCTTCA | 60.066 | 21 | 221 | 295 | 515 |
| 2 | CCCTTTCCAGCACAAATGAC | 60.495 | 20 | GCTTCAATGGTGGAATCTTCA | 60.066 | 21 | 236 | 280 | 515 |
| 3 | CTCCCTTTCCAGCACAAATG | 60.626 | 20 | GCTTCAATGGTGGAATCTTCA | 60.066 | 21 | 238 | 278 | 515 |