Simple sequence repeat (SSR)
| >UN49816 TATGAACATAAAGAATCTATATTTAATCGATATCAATATGTCAAGAGGAAAATATACAGAGCTAATACCCAGAACACTGTAAGAGGGCTAGTGC TTGCTAACTGCTAGTATAATGAAATCAATAAAATGTTTAAACGAATACATGAAGAGAGTAACATGTGTGACAGGCTGGTGTTACATTTGACAAC TTACATGAAGCACGATTACTACTGGATGGGTGGCTGTTCCAACCATTTTGCACGAAATCCAGTACCTTTACAATCGCTACAGCAAGTTGCTCCC TTTCCAGCACAAATGACGCAGCTGGAATTTCTTGAAGGTACTTCACATAGCATGTTATCACCAAGAATGAAAAACCCTGTGCCACCACACCATT TGCACTCGACGTGCCCACTGGATTCACAAGAAGAACAAGCAACAGGCCTTGGTTGCTGAGAGATTAACCAAGCTTGTTCCATACGTTTAAGGAA ACCATTACTATTATTATTATTATTTGAAGAAGAATTTTCAAAAGATGAAGATTCCACCATTGAAGCTTTTACAACAACAACACAGTTAACCGTT T |
Primers for UN49816 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATGACGCAGCTGGAATTTCT | 59.843 | 20 | GCTTCAATGGTGGAATCTTCA | 60.066 | 21 | 242 | 295 | 536 |
| 2 | CCCTTTCCAGCACAAATGAC | 60.495 | 20 | GCTTCAATGGTGGAATCTTCA | 60.066 | 21 | 257 | 280 | 536 |
| 3 | CTCCCTTTCCAGCACAAATG | 60.626 | 20 | GCTTCAATGGTGGAATCTTCA | 60.066 | 21 | 259 | 278 | 536 |